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Journal Abstract Search
236 related items for PubMed ID: 21837636
21. High quality binding modes in docking ligands to proteins. Gorelik B, Goldblum A. Proteins; 2008 May 15; 71(3):1373-86. PubMed ID: 18058908 [Abstract] [Full Text] [Related]
22. FIPSDock: a new molecular docking technique driven by fully informed swarm optimization algorithm. Liu Y, Zhao L, Li W, Zhao D, Song M, Yang Y. J Comput Chem; 2013 Jan 05; 34(1):67-75. PubMed ID: 22961860 [Abstract] [Full Text] [Related]
23. Blind docking method combining search of low-resolution binding sites with ligand pose refinement by molecular dynamics-based global optimization. Vorobjev YN. J Comput Chem; 2010 Apr 15; 31(5):1080-92. PubMed ID: 19821514 [Abstract] [Full Text] [Related]
25. A knowledge-based energy function for protein-ligand, protein-protein, and protein-DNA complexes. Zhang C, Liu S, Zhu Q, Zhou Y. J Med Chem; 2005 Apr 07; 48(7):2325-35. PubMed ID: 15801826 [Abstract] [Full Text] [Related]
26. RosettaLigand docking with full ligand and receptor flexibility. Davis IW, Baker D. J Mol Biol; 2009 Jan 16; 385(2):381-92. PubMed ID: 19041878 [Abstract] [Full Text] [Related]
27. Protein-ligand docking using mutually orthogonal Latin squares (MOLSDOCK). Viji SN, Prasad PA, Gautham N. J Chem Inf Model; 2009 Dec 16; 49(12):2687-94. PubMed ID: 19968302 [Abstract] [Full Text] [Related]
29. Empirical scoring functions for advanced protein-ligand docking with PLANTS. Korb O, Stützle T, Exner TE. J Chem Inf Model; 2009 Jan 16; 49(1):84-96. PubMed ID: 19125657 [Abstract] [Full Text] [Related]
30. Evaluation of the performance of four molecular docking programs on a diverse set of protein-ligand complexes. Li X, Li Y, Cheng T, Liu Z, Wang R. J Comput Chem; 2010 Aug 16; 31(11):2109-25. PubMed ID: 20127741 [Abstract] [Full Text] [Related]
31. GalaxyDock2: protein-ligand docking using beta-complex and global optimization. Shin WH, Kim JK, Kim DS, Seok C. J Comput Chem; 2013 Nov 15; 34(30):2647-56. PubMed ID: 24108416 [Abstract] [Full Text] [Related]
32. New and fast statistical-thermodynamic method for computation of protein-ligand binding entropy substantially improves docking accuracy. Ruvinsky AM, Kozintsev AV. J Comput Chem; 2005 Aug 15; 26(11):1089-95. PubMed ID: 15929088 [Abstract] [Full Text] [Related]
33. SDOCK: a global protein-protein docking program using stepwise force-field potentials. Zhang C, Lai L. J Comput Chem; 2011 Sep 15; 32(12):2598-612. PubMed ID: 21618559 [Abstract] [Full Text] [Related]
34. Comparative assessment of scoring functions on a diverse test set. Cheng T, Li X, Li Y, Liu Z, Wang R. J Chem Inf Model; 2009 Apr 15; 49(4):1079-93. PubMed ID: 19358517 [Abstract] [Full Text] [Related]
35. Supervised consensus scoring for docking and virtual screening. Teramoto R, Fukunishi H. J Chem Inf Model; 2007 Apr 15; 47(2):526-34. PubMed ID: 17295466 [Abstract] [Full Text] [Related]
36. Complex-type-dependent scoring functions in protein-protein docking. Li CH, Ma XH, Shen LZ, Chang S, Chen WZ, Wang CX. Biophys Chem; 2007 Aug 15; 129(1):1-10. PubMed ID: 17540496 [Abstract] [Full Text] [Related]
37. FDS: flexible ligand and receptor docking with a continuum solvent model and soft-core energy function. Taylor RD, Jewsbury PJ, Essex JW. J Comput Chem; 2003 Oct 15; 24(13):1637-56. PubMed ID: 12926007 [Abstract] [Full Text] [Related]
38. MolDock: a new technique for high-accuracy molecular docking. Thomsen R, Christensen MH. J Med Chem; 2006 Jun 01; 49(11):3315-21. PubMed ID: 16722650 [Abstract] [Full Text] [Related]
39. DrugScore(CSD)-knowledge-based scoring function derived from small molecule crystal data with superior recognition rate of near-native ligand poses and better affinity prediction. Velec HF, Gohlke H, Klebe G. J Med Chem; 2005 Oct 06; 48(20):6296-303. PubMed ID: 16190756 [Abstract] [Full Text] [Related]
40. Ensemble docking of multiple protein structures: considering protein structural variations in molecular docking. Huang SY, Zou X. Proteins; 2007 Feb 01; 66(2):399-421. PubMed ID: 17096427 [Abstract] [Full Text] [Related] Page: [Previous] [Next] [New Search]