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PUBMED FOR HANDHELDS

Journal Abstract Search


236 related items for PubMed ID: 21837636

  • 41. Bootstrap-based consensus scoring method for protein-ligand docking.
    Fukunishi H, Teramoto R, Takada T, Shimada J.
    J Chem Inf Model; 2008 May; 48(5):988-96. PubMed ID: 18426197
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  • 43. Improved protein-ligand docking using GOLD.
    Verdonk ML, Cole JC, Hartshorn MJ, Murray CW, Taylor RD.
    Proteins; 2003 Sep 01; 52(4):609-23. PubMed ID: 12910460
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  • 44. Diversity-guided Lamarckian random drift particle swarm optimization for flexible ligand docking.
    Li C, Sun J, Palade V.
    BMC Bioinformatics; 2020 Jul 06; 21(1):286. PubMed ID: 32631216
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  • 46. pyDock: electrostatics and desolvation for effective scoring of rigid-body protein-protein docking.
    Cheng TM, Blundell TL, Fernandez-Recio J.
    Proteins; 2007 Aug 01; 68(2):503-15. PubMed ID: 17444519
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  • 49. An extensive test of 14 scoring functions using the PDBbind refined set of 800 protein-ligand complexes.
    Wang R, Lu Y, Fang X, Wang S.
    J Chem Inf Comput Sci; 2004 Aug 01; 44(6):2114-25. PubMed ID: 15554682
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  • 50. Alternative to consensus scoring--a new approach toward the qualitative combination of docking algorithms.
    Wolf A, Zimmermann M, Hofmann-Apitius M.
    J Chem Inf Model; 2007 Aug 01; 47(3):1036-44. PubMed ID: 17492829
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  • 51. Docking studies of matrix metalloproteinase inhibitors: zinc parameter optimization to improve the binding free energy prediction.
    Hu X, Shelver WH.
    J Mol Graph Model; 2003 Nov 01; 22(2):115-26. PubMed ID: 12932782
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  • 52. Complementarity of hydrophobic properties in ATP-protein binding: a new criterion to rank docking solutions.
    Pyrkov TV, Kosinsky YA, Arseniev AS, Priestle JP, Jacoby E, Efremov RG.
    Proteins; 2007 Feb 01; 66(2):388-98. PubMed ID: 17094116
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  • 53. Study of protein-protein interaction using conformational space annealing.
    Lee K, Sim J, Lee J.
    Proteins; 2005 Aug 01; 60(2):257-62. PubMed ID: 15981254
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  • 58. [Computer drug design based on analysis of a target macromolecule structure. I. Search and description of a ligand binding site in a target molecule].
    Ivanov AS, Dubanov AV, Skvortsov VS, Archakov AI.
    Vopr Med Khim; 2002 Aug 01; 48(3):304-15. PubMed ID: 12243090
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  • 60. Multiple ligand simultaneous docking: orchestrated dancing of ligands in binding sites of protein.
    Li H, Li C.
    J Comput Chem; 2010 Jul 30; 31(10):2014-22. PubMed ID: 20166125
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