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Journal Abstract Search

305 related items for PubMed ID: 21953925

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  • 3. CORCEMA refinement of the bound ligand conformation within the protein binding pocket in reversibly forming weak complexes using STD-NMR intensities.
    Jayalakshmi V, Rama Krishna N.
    J Magn Reson; 2004 May; 168(1):36-45. PubMed ID: 15082247
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  • 5. Molecular dynamics simulations of carbohydrate-mimetic haptens in complex with a complementary anti-carbohydrate antibody.
    Shi Y, Pinto BM.
    Carbohydr Res; 2012 Sep 01; 358():89-95. PubMed ID: 22789717
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  • 6. Design, synthesis, and immunochemical characterization of a chimeric glycopeptide corresponding to the Shigella flexneri Y O-polysaccharide and its peptide mimic MDWNMHAA.
    Hossany BR, Johnston BD, Wen X, Borrelli S, Yuan Y, Johnson MA, Pinto BM.
    Carbohydr Res; 2009 Aug 17; 344(12):1412-27. PubMed ID: 19467535
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  • 8. Quantitative Analysis of STD-NMR Spectra of Reversibly Forming Ligand-Receptor Complexes.
    Krishna NR, Jayalakshmi V.
    Top Curr Chem; 2008 Aug 17; 273():15-54. PubMed ID: 23605458
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  • 10. A combined STD-NMR/molecular modeling protocol for predicting the binding modes of the glycosidase inhibitors kifunensine and salacinol to Golgi alpha-mannosidase II.
    Wen X, Yuan Y, Kuntz DA, Rose DR, Pinto BM.
    Biochemistry; 2005 May 10; 44(18):6729-37. PubMed ID: 15865418
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  • 11. Determination of the conformation of trimethoprim in the binding pocket of bovine dihydrofolate reductase from a STD-NMR intensity-restrained CORCEMA-ST optimization.
    Jayalakshmi V, Krishna NR.
    J Am Chem Soc; 2005 Oct 12; 127(40):14080-4. PubMed ID: 16201830
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  • 12. Ligand-receptor binding affinities from saturation transfer difference (STD) NMR spectroscopy: the binding isotherm of STD initial growth rates.
    Angulo J, Enríquez-Navas PM, Nieto PM.
    Chemistry; 2010 Jul 12; 16(26):7803-12. PubMed ID: 20496354
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  • 13. Combined molecular dynamics, STD-NMR, and CORCEMA protocol yields structural model for a UDP-galactopyranose mutase-inhibitor complex.
    Shi Y, Ardá A, Pinto BM.
    Bioorg Med Chem Lett; 2015 Mar 15; 25(6):1284-7. PubMed ID: 25681227
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  • 14. Structure, epitope mapping, and docking simulation of a gibberellin mimic peptide as a peptidyl mimotope for a hydrophobic ligand.
    Murata T, Hemmi H, Nakamura S, Shimizu K, Suzuki Y, Yamaguchi I.
    FEBS J; 2005 Oct 15; 272(19):4938-48. PubMed ID: 16176267
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  • 15. Molecular conformations in the pentasaccharide LNF-1 derived from NMR spectroscopy and molecular dynamics simulations.
    Säwén E, Stevensson B, Ostervall J, Maliniak A, Widmalm G.
    J Phys Chem B; 2011 Jun 02; 115(21):7109-21. PubMed ID: 21545157
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  • 16. Dynamic aspects of antibody:oligosaccharide complexes characterized by molecular dynamics simulations and saturation transfer difference nuclear magnetic resonance.
    Theillet FX, Frank M, Vulliez-Le Normand B, Simenel C, Hoos S, Chaffotte A, Bélot F, Guerreiro C, Nato F, Phalipon A, Mulard LA, Delepierre M.
    Glycobiology; 2011 Dec 02; 21(12):1570-9. PubMed ID: 21610193
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  • 17. Saturation transfer difference NMR spectroscopy as a technique to investigate protein-carbohydrate interactions in solution.
    Haselhorst T, Lamerz AC, Itzstein Mv.
    Methods Mol Biol; 2009 Dec 02; 534():375-86. PubMed ID: 19277538
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  • 18. Epitope mapping of the phosphorylation motif of the HIV-1 protein Vpu bound to the selective monoclonal antibody using TRNOESY and STD NMR spectroscopy.
    Gharbi-Benarous J, Bertho G, Evrard-Todeschi N, Coadou G, Megy S, Delaunay T, Benarous R, Girault JP.
    Biochemistry; 2004 Nov 23; 43(46):14555-65. PubMed ID: 15544326
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  • 19. Saturation-transfer difference NMR studies for the epitope mapping of a carbohydrate-mimetic peptide recognized by an anti-carbohydrate antibody.
    Johnson MA, Pinto BM.
    Bioorg Med Chem; 2004 Jan 02; 12(1):295-300. PubMed ID: 14697795
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  • 20. Structures of glycans bound to receptors from saturation transfer difference (STD) NMR spectroscopy: quantitative analysis by using CORCEMA-ST.
    Enríquez-Navas PM, Guzzi C, Muñoz-García JC, Nieto PM, Angulo J.
    Methods Mol Biol; 2015 Jan 02; 1273():475-87. PubMed ID: 25753726
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