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58 related items for PubMed ID: 22113279
1. Computational analysis of promoter elements and chromatin features in yeast. Wyrick JJ. Methods Mol Biol; 2012; 809():217-35. PubMed ID: 22113279 [Abstract] [Full Text] [Related]
2. Ceres: software for the integrated analysis of transcription factor binding sites and nucleosome positions in Saccharomyces cerevisiae. Morris RT, O'Connor TR, Wyrick JJ. Bioinformatics; 2010 Jan 15; 26(2):168-74. PubMed ID: 19959498 [Abstract] [Full Text] [Related]
6. Characterization of complex regulatory networks and identification of promoter regulatory elements in yeast: "in silico" and "wet-lab" approaches. Mira NP, Teixeira MC, Sá-Correia I. Methods Mol Biol; 2012 Jan 15; 809():27-48. PubMed ID: 22113266 [Abstract] [Full Text] [Related]
7. [Chromatin structure and transcription regulation in Saccharomyces cerevisiae]. Osipov SA, Preobrazhenskaia OV, Karpov VL. Mol Biol (Mosk); 2010 Jan 15; 44(6):966-79. PubMed ID: 21290820 [Abstract] [Full Text] [Related]
12. A genome-wide analysis in Saccharomyces cerevisiae demonstrates the influence of chromatin modifiers on transcription. Steinfeld I, Shamir R, Kupiec M. Nat Genet; 2007 Mar 15; 39(3):303-9. PubMed ID: 17325681 [Abstract] [Full Text] [Related]
14. Integrating genomic data to predict transcription factor binding. Holloway DT, Kon M, DeLisi C. Genome Inform; 2005 Oct 15; 16(1):83-94. PubMed ID: 16362910 [Abstract] [Full Text] [Related]
16. The multifunctional regulatory proteins ABF1 and CPF1 are involved in the formation of a nuclease-hypersensitive region in the promoter of the QCR8 gene. De Winde JH, Van Leeuwen HC, Grivell LA. Yeast; 1993 Aug 15; 9(8):847-57. PubMed ID: 8212892 [Abstract] [Full Text] [Related]
17. Mechanisms by which transcription factors gain access to target sequence elements in chromatin. Guertin MJ, Lis JT. Curr Opin Genet Dev; 2013 Apr 15; 23(2):116-23. PubMed ID: 23266217 [Abstract] [Full Text] [Related]
19. An integrative analysis of TFBS-clustered regions reveals new transcriptional regulation models on the accessible chromatin landscape. Chen H, Li H, Liu F, Zheng X, Wang S, Bo X, Shu W. Sci Rep; 2015 Feb 16; 5():8465. PubMed ID: 25682954 [Abstract] [Full Text] [Related]