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Journal Abstract Search

91 related items for PubMed ID: 22174278

  • 21. Mass spectrometry for protein quantification in biomarker discovery.
    Wang M, You J.
    Methods Mol Biol; 2012; 815():199-225. PubMed ID: 22130994
    [Abstract] [Full Text] [Related]

  • 22. BuildSummary: using a group-based approach to improve the sensitivity of peptide/protein identification in shotgun proteomics.
    Sheng Q, Dai J, Wu Y, Tang H, Zeng R.
    J Proteome Res; 2012 Mar 02; 11(3):1494-502. PubMed ID: 22217156
    [Abstract] [Full Text] [Related]

  • 23. MSNovo: a dynamic programming algorithm for de novo peptide sequencing via tandem mass spectrometry.
    Mo L, Dutta D, Wan Y, Chen T.
    Anal Chem; 2007 Jul 01; 79(13):4870-8. PubMed ID: 17550227
    [Abstract] [Full Text] [Related]

  • 24. A global analysis of peptide fragmentation variability.
    Barsnes H, Eidhammer I, Martens L.
    Proteomics; 2011 Mar 01; 11(6):1181-8. PubMed ID: 21328539
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  • 25. Statistical Evaluation of Labeled Comparative Profiling Proteomics Experiments Using Permutation Test.
    Nguyen HD, McLachlan GJ, Hill MM.
    Methods Mol Biol; 2017 Mar 01; 1549():109-117. PubMed ID: 27975287
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  • 26. Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases.
    Kim S, Gupta N, Pevzner PA.
    J Proteome Res; 2008 Aug 01; 7(8):3354-63. PubMed ID: 18597511
    [Abstract] [Full Text] [Related]

  • 27. VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.
    Matthiesen R, Trelle MB, Højrup P, Bunkenborg J, Jensen ON.
    J Proteome Res; 2005 Aug 01; 4(6):2338-47. PubMed ID: 16335983
    [Abstract] [Full Text] [Related]

  • 28. Which metaproteome? The impact of protein extraction bias on metaproteomic analyses.
    Leary DH, Hervey WJ, Deschamps JR, Kusterbeck AW, Vora GJ.
    Mol Cell Probes; 2013 Aug 01; 27(5-6):193-9. PubMed ID: 23831146
    [Abstract] [Full Text] [Related]

  • 29. The good, the bad, the ugly: validating the mass spectrometric analysis of modified peptides.
    Beck F, Lewandrowski U, Wiltfang M, Feldmann I, Geiger J, Sickmann A, Zahedi RP.
    Proteomics; 2011 Mar 01; 11(6):1099-109. PubMed ID: 21298789
    [Abstract] [Full Text] [Related]

  • 30. A hybrid method for peptide identification using integer linear optimization, local database search, and quadrupole time-of-flight or OrbiTrap tandem mass spectrometry.
    DiMaggio PA, Floudas CA, Lu B, Yates JR.
    J Proteome Res; 2008 Apr 01; 7(4):1584-93. PubMed ID: 18324765
    [Abstract] [Full Text] [Related]

  • 31. Computational approaches to peptide identification via tandem MS.
    Hubbard SJ.
    Methods Mol Biol; 2010 Apr 01; 604():23-42. PubMed ID: 20013362
    [Abstract] [Full Text] [Related]

  • 32. In vivo quantitative proteome profiling: planning and evaluation of SILAC experiments.
    Kirchner M, Selbach M.
    Methods Mol Biol; 2012 Apr 01; 893():175-99. PubMed ID: 22665302
    [Abstract] [Full Text] [Related]

  • 33. Large improvements in MS/MS-based peptide identification rates using a hybrid analysis.
    Cannon WR, Rawlins MM, Baxter DJ, Callister SJ, Lipton MS, Bryant DA.
    J Proteome Res; 2011 May 06; 10(5):2306-17. PubMed ID: 21391700
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  • 34. Search and decoy: the automatic identification of mass spectra.
    Eisenacher M, Kohl M, Turewicz M, Koch MH, Uszkoreit J, Stephan C.
    Methods Mol Biol; 2012 May 06; 893():445-88. PubMed ID: 22665317
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  • 35. Genome annotation of Anopheles gambiae using mass spectrometry-derived data.
    Kalume DE, Peri S, Reddy R, Zhong J, Okulate M, Kumar N, Pandey A.
    BMC Genomics; 2005 Sep 19; 6():128. PubMed ID: 16171517
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  • 36. MassWiz: a novel scoring algorithm with target-decoy based analysis pipeline for tandem mass spectrometry.
    Yadav AK, Kumar D, Dash D.
    J Proteome Res; 2011 May 06; 10(5):2154-60. PubMed ID: 21417338
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  • 37. A stringent approach to improve the quality of nitrotyrosine peptide identifications.
    Ghesquière B, Helsens K, Vandekerckhove J, Gevaert K.
    Proteomics; 2011 Mar 06; 11(6):1094-8. PubMed ID: 21298788
    [Abstract] [Full Text] [Related]

  • 38. A workflow to increase the detection rate of proteins from unsequenced organisms in high-throughput proteomics experiments.
    Grossmann J, Fischer B, Baerenfaller K, Owiti J, Buhmann JM, Gruissem W, Baginsky S.
    Proteomics; 2007 Dec 06; 7(23):4245-54. PubMed ID: 18040981
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  • 39. Metaproteomic analysis of a bacterial community response to cadmium exposure.
    Lacerda CM, Choe LH, Reardon KF.
    J Proteome Res; 2007 Mar 06; 6(3):1145-52. PubMed ID: 17284062
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  • 40. Computational methods for the comparative quantification of proteins in label-free LCn-MS experiments.
    Wong JW, Sullivan MJ, Cagney G.
    Brief Bioinform; 2008 Mar 06; 9(2):156-65. PubMed ID: 17905794
    [Abstract] [Full Text] [Related]

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