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Journal Abstract Search

366 related items for PubMed ID: 22234340

  • 1. C-GRAAL: common-neighbors-based global GRAph ALignment of biological networks.
    Memišević V, Pržulj N.
    Integr Biol (Camb); 2012 Jul; 4(7):734-43. PubMed ID: 22234340
    [Abstract] [Full Text] [Related]

  • 2. L-GRAAL: Lagrangian graphlet-based network aligner.
    Malod-Dognin N, Pržulj N.
    Bioinformatics; 2015 Jul 01; 31(13):2182-9. PubMed ID: 25725498
    [Abstract] [Full Text] [Related]

  • 3. GraphCrunch 2: Software tool for network modeling, alignment and clustering.
    Kuchaiev O, Stevanović A, Hayes W, Pržulj N.
    BMC Bioinformatics; 2011 Jan 19; 12():24. PubMed ID: 21244715
    [Abstract] [Full Text] [Related]

  • 4. Integrative network alignment reveals large regions of global network similarity in yeast and human.
    Kuchaiev O, Przulj N.
    Bioinformatics; 2011 May 15; 27(10):1390-6. PubMed ID: 21414992
    [Abstract] [Full Text] [Related]

  • 5. Global alignment of protein-protein interaction networks.
    Mongiovì M, Sharan R.
    Methods Mol Biol; 2013 May 15; 939():21-34. PubMed ID: 23192538
    [Abstract] [Full Text] [Related]

  • 6. Pairwise alignment of interaction networks by fast identification of maximal conserved patterns.
    Tian W, Samatova NF.
    Pac Symp Biocomput; 2009 May 15; ():99-110. PubMed ID: 19209698
    [Abstract] [Full Text] [Related]

  • 7. k-Partite cliques of protein interactions: A novel subgraph topology for functional coherence analysis on PPI networks.
    Liu Q, Chen YP, Li J.
    J Theor Biol; 2014 Jan 07; 340():146-54. PubMed ID: 24056214
    [Abstract] [Full Text] [Related]

  • 8.
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  • 9. Discovering reliable protein interactions from high-throughput experimental data using network topology.
    Chen J, Hsu W, Lee ML, Ng SK.
    Artif Intell Med; 2005 Jan 07; 35(1-2):37-47. PubMed ID: 16055319
    [Abstract] [Full Text] [Related]

  • 10. Fuse: multiple network alignment via data fusion.
    Gligorijević V, Malod-Dognin N, Pržulj N.
    Bioinformatics; 2016 Apr 15; 32(8):1195-203. PubMed ID: 26668003
    [Abstract] [Full Text] [Related]

  • 11. Learning the structure of protein-protein interaction networks.
    Kuchaiev O, Przulj N.
    Pac Symp Biocomput; 2009 Apr 15; ():39-50. PubMed ID: 19209694
    [Abstract] [Full Text] [Related]

  • 12. AVID: an integrative framework for discovering functional relationships among proteins.
    Jiang T, Keating AE.
    BMC Bioinformatics; 2005 Jun 01; 6():136. PubMed ID: 15929793
    [Abstract] [Full Text] [Related]

  • 13. Unified Alignment of Protein-Protein Interaction Networks.
    Malod-Dognin N, Ban K, Pržulj N.
    Sci Rep; 2017 Apr 19; 7(1):953. PubMed ID: 28424527
    [Abstract] [Full Text] [Related]

  • 14. MAGNA: Maximizing Accuracy in Global Network Alignment.
    Saraph V, Milenković T.
    Bioinformatics; 2014 Oct 15; 30(20):2931-40. PubMed ID: 25015987
    [Abstract] [Full Text] [Related]

  • 15. Pairwise alignment of protein interaction networks.
    Koyutürk M, Kim Y, Topkara U, Subramaniam S, Szpankowski W, Grama A.
    J Comput Biol; 2006 Mar 15; 13(2):182-99. PubMed ID: 16597234
    [Abstract] [Full Text] [Related]

  • 16. Identification of functional modules in a PPI network by clique percolation clustering.
    Zhang S, Ning X, Zhang XS.
    Comput Biol Chem; 2006 Dec 15; 30(6):445-51. PubMed ID: 17098476
    [Abstract] [Full Text] [Related]

  • 17. 2.5D visualisation of overlapping biological networks.
    Fung DC, Hong SH, Koschützki D, Schreiber F, Xu K.
    J Integr Bioinform; 2008 Nov 10; 5(1):. PubMed ID: 20134057
    [Abstract] [Full Text] [Related]

  • 18. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
    Maskey S, Cho YR.
    BMC Genomics; 2019 Dec 24; 20(Suppl 9):964. PubMed ID: 31874635
    [Abstract] [Full Text] [Related]

  • 19. A new graph-based method for pairwise global network alignment.
    Klau GW.
    BMC Bioinformatics; 2009 Jan 30; 10 Suppl 1(Suppl 1):S59. PubMed ID: 19208162
    [Abstract] [Full Text] [Related]

  • 20. Path lengths in protein-protein interaction networks and biological complexity.
    Xu K, Bezakova I, Bunimovich L, Yi SV.
    Proteomics; 2011 May 30; 11(10):1857-67. PubMed ID: 21480527
    [Abstract] [Full Text] [Related]

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