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Journal Abstract Search

129 related items for PubMed ID: 22308148

  • 1. Improving your target-template alignment with MODalign.
    Barbato A, Benkert P, Schwede T, Tramontano A, Kosinski J.
    Bioinformatics; 2012 Apr 01; 28(7):1038-9. PubMed ID: 22308148
    [Abstract] [Full Text] [Related]

  • 2. MODexplorer: an integrated tool for exploring protein sequence, structure and function relationships.
    Kosinski J, Barbato A, Tramontano A.
    Bioinformatics; 2013 Apr 01; 29(7):953-4. PubMed ID: 23396123
    [Abstract] [Full Text] [Related]

  • 3. SALIGN: a web server for alignment of multiple protein sequences and structures.
    Braberg H, Webb BM, Tjioe E, Pieper U, Sali A, Madhusudhan MS.
    Bioinformatics; 2012 Aug 01; 28(15):2072-3. PubMed ID: 22618536
    [Abstract] [Full Text] [Related]

  • 4. Sequence alignment visualization in HTML5 without Java.
    Gille C, Birgit W, Gille A.
    Bioinformatics; 2014 Jan 01; 30(1):121-2. PubMed ID: 24273246
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  • 8. Alignment-Annotator web server: rendering and annotating sequence alignments.
    Gille C, Fähling M, Weyand B, Wieland T, Gille A.
    Nucleic Acids Res; 2014 Jul 01; 42(Web Server issue):W3-6. PubMed ID: 24813445
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  • 9. SFESA: a web server for pairwise alignment refinement by secondary structure shifts.
    Tong J, Pei J, Grishin NV.
    BMC Bioinformatics; 2015 Sep 03; 16(1):282. PubMed ID: 26335387
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  • 10. Look-Align: an interactive web-based multiple sequence alignment viewer with polymorphism analysis support.
    Canaran P, Stein L, Ware D.
    Bioinformatics; 2006 Apr 01; 22(7):885-6. PubMed ID: 16473875
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  • 12. ALINE: a WYSIWYG protein-sequence alignment editor for publication-quality alignments.
    Bond CS, Schüttelkopf AW.
    Acta Crystallogr D Biol Crystallogr; 2009 May 01; 65(Pt 5):510-2. PubMed ID: 19390156
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  • 13. GoFigure: automated Gene Ontology annotation.
    Khan S, Situ G, Decker K, Schmidt CJ.
    Bioinformatics; 2003 Dec 12; 19(18):2484-5. PubMed ID: 14668239
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  • 14. PRALINE: a multiple sequence alignment toolbox that integrates homology-extended and secondary structure information.
    Simossis VA, Heringa J.
    Nucleic Acids Res; 2005 Jul 01; 33(Web Server issue):W289-94. PubMed ID: 15980472
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  • 15. APDB: a web server to evaluate the accuracy of sequence alignments using structural information.
    Armougom F, Poirot O, Moretti S, Higgins DG, Bucher P, Keduas V, Notredame C.
    Bioinformatics; 2006 Oct 01; 22(19):2439-40. PubMed ID: 17032685
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  • 16. The PRALINE online server: optimising progressive multiple alignment on the web.
    Simossis VA, Heringa J.
    Comput Biol Chem; 2003 Oct 01; 27(4-5):511-9. PubMed ID: 14642759
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  • 17. 3MOTIF: visualizing conserved protein sequence motifs in the protein structure database.
    Bennett SP, Nevill-Manning CG, Brutlag DL.
    Bioinformatics; 2003 Mar 01; 19(4):541-2. PubMed ID: 12611811
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  • 18. MSACompro: protein multiple sequence alignment using predicted secondary structure, solvent accessibility, and residue-residue contacts.
    Deng X, Cheng J.
    BMC Bioinformatics; 2011 Dec 14; 12():472. PubMed ID: 22168237
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  • 19. PROMALS3D web server for accurate multiple protein sequence and structure alignments.
    Pei J, Tang M, Grishin NV.
    Nucleic Acids Res; 2008 Jul 01; 36(Web Server issue):W30-4. PubMed ID: 18503087
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  • 20. XSuLT: a web server for structural annotation and representation of sequence-structure alignments.
    Ochoa-Montaño B, Blundell TL.
    Nucleic Acids Res; 2017 Jul 03; 45(W1):W381-W387. PubMed ID: 28510698
    [Abstract] [Full Text] [Related]

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