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Journal Abstract Search

202 related items for PubMed ID: 2231713

  • 1. Solution conformation of purine-pyrimidine DNA octamers using nuclear magnetic resonance, restrained molecular dynamics and NOE-based refinement.
    Baleja JD, Germann MW, van de Sande JH, Sykes BD.
    J Mol Biol; 1990 Oct 05; 215(3):411-28. PubMed ID: 2231713
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  • 6. Metropolis Monte Carlo calculations of DNA structure using internal coordinates and NMR distance restraints: an alternative method for generating a high-resolution solution structure.
    Ulyanov NB, Schmitz U, James TL.
    J Biomol NMR; 1993 Sep 05; 3(5):547-68. PubMed ID: 8219740
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  • 7. Solution structure of a conserved DNA sequence from the HIV-1 genome: restrained molecular dynamics simulation with distance and torsion angle restraints derived from two-dimensional NMR spectra.
    Mujeeb A, Kerwin SM, Kenyon GL, James TL.
    Biochemistry; 1993 Dec 14; 32(49):13419-31. PubMed ID: 8257678
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  • 8. Solution structure of an oligodeoxynucleotide containing the human N-ras codon 12 sequence refined from 1H NMR using molecular dynamics restrained by nuclear Overhauser effects.
    Zegar IS, Stone MP.
    Chem Res Toxicol; 1996 Dec 14; 9(1):114-25. PubMed ID: 8924579
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  • 11. Determining local conformational variations in DNA. Nuclear magnetic resonance structures of the DNA duplexes d(CGCCTAATCG) and d(CGTCACGCGC) generated using back-calculation of the nuclear Overhauser effect spectra, a distance geometry algorithm and constrained molecular dynamics.
    Metzler WJ, Wang C, Kitchen DB, Levy RM, Pardi A.
    J Mol Biol; 1990 Aug 05; 214(3):711-36. PubMed ID: 2167379
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  • 14. Two-dimensional COSY and two-dimensional NOE spectroscopy of d(AC)4.d(GT)4: extraction of structural constraints.
    Gochin M, Zon G, James TL.
    Biochemistry; 1990 Dec 25; 29(51):11161-71. PubMed ID: 2271703
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  • 15. Refinement of the solution structure of the DNA hexamer 5'd(GCATGC)2: combined use of nuclear magnetic resonance and restrained molecular dynamics.
    Nilges M, Clore GM, Gronenborn AM, Brunger AT, Karplus M, Nilsson L.
    Biochemistry; 1987 Jun 16; 26(12):3718-33. PubMed ID: 3651407
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  • 16. Structure of DNA hexamer sequence d-CGATCG by two-dimensional nuclear magnetic resonance spectroscopy and restrained molecular dynamics.
    Barthwal R, Monica, Awasthi P, Srivastava N, Sharma U, Kaur M, Govil G.
    J Biomol Struct Dyn; 2003 Dec 16; 21(3):407-23. PubMed ID: 14616036
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  • 17. Two-dimensional 1H and 31P NMR spectra and restrained molecular dynamics structure of an oligodeoxyribonucleotide duplex refined via a hybrid relaxation matrix procedure.
    Powers R, Jones CR, Gorenstein DG.
    J Biomol Struct Dyn; 1990 Oct 16; 8(2):253-94. PubMed ID: 2268403
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  • 18. Refinement of the solution structure of the DNA dodecamer 5'd(CGCGPATTCGCG)2 containing a stable purine-thymine base pair: combined use of nuclear magnetic resonance and restrained molecular dynamics.
    Clore GM, Oschkinat H, McLaughlin LW, Benseler F, Happ CS, Happ E, Gronenborn AM.
    Biochemistry; 1988 May 31; 27(11):4185-97. PubMed ID: 3415980
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  • 19. Investigation of the solution structure of a DNA octamer [d(GGAATTCC)]2 using two-dimensional nuclear Overhauser enhancement spectroscopy.
    Broido MS, James TL, Zon G, Keepers JW.
    Eur J Biochem; 1985 Jul 01; 150(1):117-28. PubMed ID: 2990923
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  • 20. Molecular dynamics with weighted time-averaged restraints for a DNA octamer. Dynamic interpretation of nuclear magnetic resonance data.
    Schmitz U, Ulyanov NB, Kumar A, James TL.
    J Mol Biol; 1993 Nov 20; 234(2):373-89. PubMed ID: 8230221
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