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Journal Abstract Search

197 related items for PubMed ID: 22384178

  • 1. Markov dynamics as a zooming lens for multiscale community detection: non clique-like communities and the field-of-view limit.
    Schaub MT, Delvenne JC, Yaliraki SN, Barahona M.
    PLoS One; 2012; 7(2):e32210. PubMed ID: 22384178
    [Abstract] [Full Text] [Related]

  • 2. Encoding dynamics for multiscale community detection: Markov time sweeping for the map equation.
    Schaub MT, Lambiotte R, Barahona M.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2012 Aug; 86(2 Pt 2):026112. PubMed ID: 23005830
    [Abstract] [Full Text] [Related]

  • 3. Stability of graph communities across time scales.
    Delvenne JC, Yaliraki SN, Barahona M.
    Proc Natl Acad Sci U S A; 2010 Jul 20; 107(29):12755-60. PubMed ID: 20615936
    [Abstract] [Full Text] [Related]

  • 4. Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).
    Foffi G, Pastore A, Piazza F, Temussi PA.
    Phys Biol; 2013 Aug 20; 10(4):040301. PubMed ID: 23912807
    [Abstract] [Full Text] [Related]

  • 5. Identifying protein complexes from interaction networks based on clique percolation and distance restriction.
    Wang J, Liu B, Li M, Pan Y.
    BMC Genomics; 2010 Nov 02; 11 Suppl 2(Suppl 2):S10. PubMed ID: 21047377
    [Abstract] [Full Text] [Related]

  • 6. Detecting Community Structure by Using a Constrained Label Propagation Algorithm.
    Chin JH, Ratnavelu K.
    PLoS One; 2016 Nov 02; 11(5):e0155320. PubMed ID: 27176470
    [Abstract] [Full Text] [Related]

  • 7. Using higher-order Markov models to reveal flow-based communities in networks.
    Salnikov V, Schaub MT, Lambiotte R.
    Sci Rep; 2016 Mar 31; 6():23194. PubMed ID: 27029508
    [Abstract] [Full Text] [Related]

  • 8. Modeling complex metabolic reactions, ecological systems, and financial and legal networks with MIANN models based on Markov-Wiener node descriptors.
    Duardo-Sánchez A, Munteanu CR, Riera-Fernández P, López-Díaz A, Pazos A, González-Díaz H.
    J Chem Inf Model; 2014 Jan 27; 54(1):16-29. PubMed ID: 24320872
    [Abstract] [Full Text] [Related]

  • 9. k-Partite cliques of protein interactions: A novel subgraph topology for functional coherence analysis on PPI networks.
    Liu Q, Chen YP, Li J.
    J Theor Biol; 2014 Jan 07; 340():146-54. PubMed ID: 24056214
    [Abstract] [Full Text] [Related]

  • 10. The maximum clique enumeration problem: algorithms, applications, and implementations.
    Eblen JD, Phillips CA, Rogers GL, Langston MA.
    BMC Bioinformatics; 2012 Jun 25; 13 Suppl 10(Suppl 10):S5. PubMed ID: 22759429
    [Abstract] [Full Text] [Related]

  • 11. Finding local communities in protein networks.
    Voevodski K, Teng SH, Xia Y.
    BMC Bioinformatics; 2009 Sep 18; 10():297. PubMed ID: 19765306
    [Abstract] [Full Text] [Related]

  • 12. A Shadowing Problem in the Detection of Overlapping Communities: Lifting the Resolution Limit through a Cascading Procedure.
    Young JG, Allard A, Hébert-Dufresne L, Dubé LJ.
    PLoS One; 2015 Sep 18; 10(10):e0140133. PubMed ID: 26461919
    [Abstract] [Full Text] [Related]

  • 13. Multiscale community detection in Cytoscape.
    Singhal A, Cao S, Churas C, Pratt D, Fortunato S, Zheng F, Ideker T.
    PLoS Comput Biol; 2020 Oct 18; 16(10):e1008239. PubMed ID: 33095781
    [Abstract] [Full Text] [Related]

  • 14. Sequential algorithm for fast clique percolation.
    Kumpula JM, Kivelä M, Kaski K, Saramäki J.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2008 Aug 18; 78(2 Pt 2):026109. PubMed ID: 18850899
    [Abstract] [Full Text] [Related]

  • 15. Super.Complex: A supervised machine learning pipeline for molecular complex detection in protein-interaction networks.
    Palukuri MV, Marcotte EM.
    PLoS One; 2021 Aug 18; 16(12):e0262056. PubMed ID: 34972161
    [Abstract] [Full Text] [Related]

  • 16. Markov random field-based statistical character structure modeling for handwritten Chinese character recognition.
    Zeng J, Liu ZQ.
    IEEE Trans Pattern Anal Mach Intell; 2008 May 18; 30(5):767-80. PubMed ID: 18369248
    [Abstract] [Full Text] [Related]

  • 17. Overlapping community detection in networks based on link partitioning and partitioning around medoids.
    Ponomarenko A, Pitsoulis L, Shamshetdinov M.
    PLoS One; 2021 May 18; 16(8):e0255717. PubMed ID: 34432789
    [Abstract] [Full Text] [Related]

  • 18. Exploring community structure in biological networks with random graphs.
    Sah P, Singh LO, Clauset A, Bansal S.
    BMC Bioinformatics; 2014 Jun 25; 15():220. PubMed ID: 24965130
    [Abstract] [Full Text] [Related]

  • 19. Heuristics for chemical compound matching.
    Hattori M, Okuno Y, Goto S, Kanehisa M.
    Genome Inform; 2003 Jun 25; 14():144-53. PubMed ID: 15706529
    [Abstract] [Full Text] [Related]

  • 20. Clique Community Persistence: A Topological Visual Analysis Approach for Complex Networks.
    Rieck B, Fugacci U, Lukasczyk J, Leitte H.
    IEEE Trans Vis Comput Graph; 2018 Jan 25; 24(1):822-831. PubMed ID: 28866539
    [Abstract] [Full Text] [Related]

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