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Journal Abstract Search

224 related items for PubMed ID: 22522134

  • 1. Improving GO semantic similarity measures by exploring the ontology beneath the terms and modelling uncertainty.
    Yang H, Nepusz T, Paccanaro A.
    Bioinformatics; 2012 May 15; 28(10):1383-9. PubMed ID: 22522134
    [Abstract] [Full Text] [Related]

  • 2. IntelliGO: a new vector-based semantic similarity measure including annotation origin.
    Benabderrahmane S, Smail-Tabbone M, Poch O, Napoli A, Devignes MD.
    BMC Bioinformatics; 2010 Dec 01; 11():588. PubMed ID: 21122125
    [Abstract] [Full Text] [Related]

  • 3. Exploring information from the topology beneath the Gene Ontology terms to improve semantic similarity measures.
    Zhang SB, Lai JH.
    Gene; 2016 Jul 15; 586(1):148-57. PubMed ID: 27080954
    [Abstract] [Full Text] [Related]

  • 4. A relation based measure of semantic similarity for Gene Ontology annotations.
    Sheehan B, Quigley A, Gaudin B, Dobson S.
    BMC Bioinformatics; 2008 Nov 04; 9():468. PubMed ID: 18983678
    [Abstract] [Full Text] [Related]

  • 5. TopoICSim: a new semantic similarity measure based on gene ontology.
    Ehsani R, Drabløs F.
    BMC Bioinformatics; 2016 Jul 29; 17(1):296. PubMed ID: 27473391
    [Abstract] [Full Text] [Related]

  • 6. GO functional similarity clustering depends on similarity measure, clustering method, and annotation completeness.
    Liu M, Thomas PD.
    BMC Bioinformatics; 2019 Mar 27; 20(1):155. PubMed ID: 30917779
    [Abstract] [Full Text] [Related]

  • 7. Measuring semantic similarities by combining gene ontology annotations and gene co-function networks.
    Peng J, Uygun S, Kim T, Wang Y, Rhee SY, Chen J.
    BMC Bioinformatics; 2015 Feb 14; 16():44. PubMed ID: 25886899
    [Abstract] [Full Text] [Related]

  • 8. Correlating information contents of gene ontology terms to infer semantic similarity of gene products.
    Gan M.
    Comput Math Methods Med; 2014 Feb 14; 2014():891842. PubMed ID: 24963342
    [Abstract] [Full Text] [Related]

  • 9. A new method to measure the semantic similarity of GO terms.
    Wang JZ, Du Z, Payattakool R, Yu PS, Chen CF.
    Bioinformatics; 2007 May 15; 23(10):1274-81. PubMed ID: 17344234
    [Abstract] [Full Text] [Related]

  • 10. Correlation between gene expression and GO semantic similarity.
    Sevilla JL, Segura V, Podhorski A, Guruceaga E, Mato JM, Martínez-Cruz LA, Corrales FJ, Rubio A.
    IEEE/ACM Trans Comput Biol Bioinform; 2005 May 15; 2(4):330-8. PubMed ID: 17044170
    [Abstract] [Full Text] [Related]

  • 11. An improved approach to infer protein-protein interaction based on a hierarchical vector space model.
    Zhang J, Jia K, Jia J, Qian Y.
    BMC Bioinformatics; 2018 Apr 27; 19(1):161. PubMed ID: 29699476
    [Abstract] [Full Text] [Related]

  • 12. A novel insight into Gene Ontology semantic similarity.
    Xu Y, Guo M, Shi W, Liu X, Wang C.
    Genomics; 2013 Jun 27; 101(6):368-75. PubMed ID: 23628645
    [Abstract] [Full Text] [Related]

  • 13. Multi-Factored Gene-Gene Proximity Measures Exploiting Biological Knowledge Extracted from Gene Ontology: Application in Gene Clustering.
    Acharya S, Saha S, Pradhan P.
    IEEE/ACM Trans Comput Biol Bioinform; 2020 Jun 27; 17(1):207-219. PubMed ID: 29994130
    [Abstract] [Full Text] [Related]

  • 14. Measuring gene functional similarity based on group-wise comparison of GO terms.
    Teng Z, Guo M, Liu X, Dai Q, Wang C, Xuan P.
    Bioinformatics; 2013 Jun 01; 29(11):1424-32. PubMed ID: 23572412
    [Abstract] [Full Text] [Related]

  • 15. Interspecies gene function prediction using semantic similarity.
    Yu G, Luo W, Fu G, Wang J.
    BMC Syst Biol; 2016 Dec 23; 10(Suppl 4):121. PubMed ID: 28155711
    [Abstract] [Full Text] [Related]

  • 16. Improving the measurement of semantic similarity by combining gene ontology and co-functional network: a random walk based approach.
    Peng J, Zhang X, Hui W, Lu J, Li Q, Liu S, Shang X.
    BMC Syst Biol; 2018 Mar 19; 12(Suppl 2):18. PubMed ID: 29560823
    [Abstract] [Full Text] [Related]

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  • 19. Bi-directional semantic similarity for gene ontology to optimize biological and clinical analyses.
    Bien SJ, Park CH, Shim HJ, Yang W, Kim J, Kim JH.
    J Am Med Inform Assoc; 2012 Mar 19; 19(5):765-74. PubMed ID: 22374934
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