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Journal Abstract Search

305 related items for PubMed ID: 22583700

  • 1. Promoter G-quadruplex sequences are targets for base oxidation and strand cleavage during hypoxia-induced transcription.
    Clark DW, Phang T, Edwards MG, Geraci MW, Gillespie MN.
    Free Radic Biol Med; 2012 Jul 01; 53(1):51-9. PubMed ID: 22583700
    [Abstract] [Full Text] [Related]

  • 2. An oxidative DNA "damage" and repair mechanism localized in the VEGF promoter is important for hypoxia-induced VEGF mRNA expression.
    Pastukh V, Roberts JT, Clark DW, Bardwell GC, Patel M, Al-Mehdi AB, Borchert GM, Gillespie MN.
    Am J Physiol Lung Cell Mol Physiol; 2015 Dec 01; 309(11):L1367-75. PubMed ID: 26432868
    [Abstract] [Full Text] [Related]

  • 3. Oxidative Modification of the Potential G-Quadruplex Sequence in the PCNA Gene Promoter Can Turn on Transcription.
    Redstone SCJ, Fleming AM, Burrows CJ.
    Chem Res Toxicol; 2019 Mar 18; 32(3):437-446. PubMed ID: 30604962
    [Abstract] [Full Text] [Related]

  • 4. The regulatory G4 motif of the Kirsten ras (KRAS) gene is sensitive to guanine oxidation: implications on transcription.
    Cogoi S, Ferino A, Miglietta G, Pedersen EB, Xodo LE.
    Nucleic Acids Res; 2018 Jan 25; 46(2):661-676. PubMed ID: 29165690
    [Abstract] [Full Text] [Related]

  • 5. Oxidative DNA damage is epigenetic by regulating gene transcription via base excision repair.
    Fleming AM, Ding Y, Burrows CJ.
    Proc Natl Acad Sci U S A; 2017 Mar 07; 114(10):2604-2609. PubMed ID: 28143930
    [Abstract] [Full Text] [Related]

  • 6. Endogenous oxidized DNA bases and APE1 regulate the formation of G-quadruplex structures in the genome.
    Roychoudhury S, Pramanik S, Harris HL, Tarpley M, Sarkar A, Spagnol G, Sorgen PL, Chowdhury D, Band V, Klinkebiel D, Bhakat KK.
    Proc Natl Acad Sci U S A; 2020 May 26; 117(21):11409-11420. PubMed ID: 32404420
    [Abstract] [Full Text] [Related]

  • 7. [Oxidative Probing of the G4 DNA Structure by Znp1 Porphyrin within Sequences of MYC and TERT Promotors].
    Chashchina GV, Kaluzhny DN.
    Mol Biol (Mosk); 2023 May 26; 57(3):528-536. PubMed ID: 37326057
    [Abstract] [Full Text] [Related]

  • 8. 8-Oxo-7,8-dihydroguanine in the Context of a Gene Promoter G-Quadruplex Is an On-Off Switch for Transcription.
    Fleming AM, Zhu J, Ding Y, Burrows CJ.
    ACS Chem Biol; 2017 Sep 15; 12(9):2417-2426. PubMed ID: 28829124
    [Abstract] [Full Text] [Related]

  • 9. Interplay of Guanine Oxidation and G-Quadruplex Folding in Gene Promoters.
    Fleming AM, Burrows CJ.
    J Am Chem Soc; 2020 Jan 22; 142(3):1115-1136. PubMed ID: 31880930
    [Abstract] [Full Text] [Related]

  • 10. Sequence-specific oxidative base modifications in hypoxia-inducible genes.
    Pastukh V, Ruchko M, Gorodnya O, Wilson GL, Gillespie MN.
    Free Radic Biol Med; 2007 Dec 15; 43(12):1616-26. PubMed ID: 18037127
    [Abstract] [Full Text] [Related]

  • 11. Oxidative Damage Induces a Vacancy G-Quadruplex That Binds Guanine Metabolites: Solution Structure of a cGMP Fill-in Vacancy G-Quadruplex in the Oxidized BLM Gene Promoter.
    Wang KB, Liu Y, Li Y, Dickerhoff J, Li J, Yang MH, Yang D, Kong LY.
    J Am Chem Soc; 2022 Apr 13; 144(14):6361-6372. PubMed ID: 35352895
    [Abstract] [Full Text] [Related]

  • 12. Promoter G-quadruplexes and transcription factors cooperate to shape the cell type-specific transcriptome.
    Lago S, Nadai M, Cernilogar FM, Kazerani M, Domíniguez Moreno H, Schotta G, Richter SN.
    Nat Commun; 2021 Jun 23; 12(1):3885. PubMed ID: 34162892
    [Abstract] [Full Text] [Related]

  • 13. Oxidative Modification of Guanine in a Potential Z-DNA-Forming Sequence of a Gene Promoter Impacts Gene Expression.
    Fleming AM, Zhu J, Ding Y, Esders S, Burrows CJ.
    Chem Res Toxicol; 2019 May 20; 32(5):899-909. PubMed ID: 30821442
    [Abstract] [Full Text] [Related]

  • 14. Effect of DNA Glycosylases OGG1 and Neil1 on Oxidized G-Rich Motif in the KRAS Promoter.
    Ferino A, Xodo LE.
    Int J Mol Sci; 2021 Jan 24; 22(3):. PubMed ID: 33498912
    [Abstract] [Full Text] [Related]

  • 15. Oxidative DNA modifications in hypoxic signaling.
    Gillespie MN, Pastukh V, Ruchko MV.
    Ann N Y Acad Sci; 2009 Oct 24; 1177():140-50. PubMed ID: 19845616
    [Abstract] [Full Text] [Related]

  • 16. Structure of a DNA G-quadruplex that Modulates SP1 Binding Sites Architecture in HIV-1 Promoter.
    De Rache A, Marquevielle J, Bouaziz S, Vialet B, Andreola ML, Mergny JL, Amrane S.
    J Mol Biol; 2024 Jan 15; 436(2):168359. PubMed ID: 37952768
    [Abstract] [Full Text] [Related]

  • 17. Facilitation of a structural transition in the polypurine/polypyrimidine tract within the proximal promoter region of the human VEGF gene by the presence of potassium and G-quadruplex-interactive agents.
    Sun D, Guo K, Rusche JJ, Hurley LH.
    Nucleic Acids Res; 2005 Jan 15; 33(18):6070-80. PubMed ID: 16239639
    [Abstract] [Full Text] [Related]

  • 18. 2'-Fluoroarabinonucleic acid modification traps G-quadruplex and i-motif structures in human telomeric DNA.
    Abou Assi H, El-Khoury R, González C, Damha MJ.
    Nucleic Acids Res; 2017 Nov 16; 45(20):11535-11546. PubMed ID: 29036537
    [Abstract] [Full Text] [Related]

  • 19. Oxidized guanine lesions as modulators of gene transcription. Altered p50 binding affinity and repair shielding by 7,8-dihydro-8-oxo-2'-deoxyguanosine lesions in the NF-kappaB promoter element.
    Hailer-Morrison MK, Kotler JM, Martin BD, Sugden KD.
    Biochemistry; 2003 Aug 19; 42(32):9761-70. PubMed ID: 12911319
    [Abstract] [Full Text] [Related]

  • 20. G-quadruplex (G4) motifs in the maize (Zea mays L.) genome are enriched at specific locations in thousands of genes coupled to energy status, hypoxia, low sugar, and nutrient deprivation.
    Andorf CM, Kopylov M, Dobbs D, Koch KE, Stroupe ME, Lawrence CJ, Bass HW.
    J Genet Genomics; 2014 Dec 20; 41(12):627-47. PubMed ID: 25527104
    [Abstract] [Full Text] [Related]

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