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Journal Abstract Search

166 related items for PubMed ID: 22595001

  • 1. An overlapping module identification method in protein-protein interaction networks.
    Wang X, Li L, Cheng Y.
    BMC Bioinformatics; 2012 May 08; 13 Suppl 7(Suppl 7):S4. PubMed ID: 22595001
    [Abstract] [Full Text] [Related]

  • 2. A hybrid clustering algorithm for identifying modules in Protein-Protein Interaction networks.
    Yu L, Gao L, Sun PG.
    Int J Data Min Bioinform; 2010 May 08; 4(5):600-15. PubMed ID: 21133044
    [Abstract] [Full Text] [Related]

  • 3. MINE: Module Identification in Networks.
    Rhrissorrakrai K, Gunsalus KC.
    BMC Bioinformatics; 2011 May 23; 12():192. PubMed ID: 21605434
    [Abstract] [Full Text] [Related]

  • 4. Identifying hierarchical and overlapping protein complexes based on essential protein-protein interactions and "seed-expanding" method.
    Ren J, Zhou W, Wang J.
    Biomed Res Int; 2014 May 23; 2014():838714. PubMed ID: 25143945
    [Abstract] [Full Text] [Related]

  • 5. Identification of functional modules in a PPI network by clique percolation clustering.
    Zhang S, Ning X, Zhang XS.
    Comput Biol Chem; 2006 Dec 23; 30(6):445-51. PubMed ID: 17098476
    [Abstract] [Full Text] [Related]

  • 6. A novel subgradient-based optimization algorithm for blockmodel functional module identification.
    Wang Y, Qian X.
    BMC Bioinformatics; 2013 Dec 23; 14 Suppl 2(Suppl 2):S23. PubMed ID: 23368964
    [Abstract] [Full Text] [Related]

  • 7. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
    Yu L, Gao L, Li K, Zhao Y, Chiu DK.
    Comput Biol Chem; 2011 Oct 12; 35(5):298-307. PubMed ID: 22000801
    [Abstract] [Full Text] [Related]

  • 8. Identification of hierarchical and overlapping functional modules in PPI networks.
    Wang J, Ren J, Li M, Wu FX.
    IEEE Trans Nanobioscience; 2012 Dec 12; 11(4):386-93. PubMed ID: 22955967
    [Abstract] [Full Text] [Related]

  • 9. Detecting overlapping protein complexes in protein-protein interaction networks.
    Nepusz T, Yu H, Paccanaro A.
    Nat Methods; 2012 Mar 18; 9(5):471-2. PubMed ID: 22426491
    [Abstract] [Full Text] [Related]

  • 10. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
    Ou-Yang L, Yan H, Zhang XF.
    BMC Bioinformatics; 2017 Dec 01; 18(Suppl 13):463. PubMed ID: 29219066
    [Abstract] [Full Text] [Related]

  • 11. Predicting overlapping protein complexes from weighted protein interaction graphs by gradually expanding dense neighborhoods.
    Dimitrakopoulos C, Theofilatos K, Pegkas A, Likothanassis S, Mavroudi S.
    Artif Intell Med; 2016 Jul 01; 71():62-9. PubMed ID: 27506132
    [Abstract] [Full Text] [Related]

  • 12. An effective approach to detecting both small and large complexes from protein-protein interaction networks.
    Xu B, Wang Y, Wang Z, Zhou J, Zhou S, Guan J.
    BMC Bioinformatics; 2017 Oct 16; 18(Suppl 12):419. PubMed ID: 29072136
    [Abstract] [Full Text] [Related]

  • 13. Topological and functional comparison of community detection algorithms in biological networks.
    Rahiminejad S, Maurya MR, Subramaniam S.
    BMC Bioinformatics; 2019 Apr 27; 20(1):212. PubMed ID: 31029085
    [Abstract] [Full Text] [Related]

  • 14. Efficient and accurate Greedy Search Methods for mining functional modules in protein interaction networks.
    He J, Li C, Ye B, Zhong W.
    BMC Bioinformatics; 2012 Jun 25; 13 Suppl 10(Suppl 10):S19. PubMed ID: 22759424
    [Abstract] [Full Text] [Related]

  • 15. Protein Complexes Prediction Method Based on Core-Attachment Structure and Functional Annotations.
    Li B, Liao B.
    Int J Mol Sci; 2017 Sep 06; 18(9):. PubMed ID: 28878201
    [Abstract] [Full Text] [Related]

  • 16. Functional module identification in protein interaction networks by interaction patterns.
    Wang Y, Qian X.
    Bioinformatics; 2014 Jan 01; 30(1):81-93. PubMed ID: 24085567
    [Abstract] [Full Text] [Related]

  • 17. In search of the biological significance of modular structures in protein networks.
    Wang Z, Zhang J.
    PLoS Comput Biol; 2007 Jun 01; 3(6):e107. PubMed ID: 17542644
    [Abstract] [Full Text] [Related]

  • 18. The relative vertex clustering value--a new criterion for the fast discovery of functional modules in protein interaction networks.
    Ibrahim ZM, Ngom A.
    BMC Bioinformatics; 2015 Jun 01; 16 Suppl 4(Suppl 4):S3. PubMed ID: 25734691
    [Abstract] [Full Text] [Related]

  • 19. Diffusion model based spectral clustering for protein-protein interaction networks.
    Inoue K, Li W, Kurata H.
    PLoS One; 2010 Sep 07; 5(9):e12623. PubMed ID: 20830307
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  • 20. A novel essential protein identification method based on PPI networks and gene expression data.
    Zhong J, Tang C, Peng W, Xie M, Sun Y, Tang Q, Xiao Q, Yang J.
    BMC Bioinformatics; 2021 May 13; 22(1):248. PubMed ID: 33985429
    [Abstract] [Full Text] [Related]

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