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Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

257 related items for PubMed ID: 22730436

  • 1. RESQUE: network reduction using semi-Markov random walk scores for efficient querying of biological networks.
    Sahraeian SM, Yoon BJ.
    Bioinformatics; 2012 Aug 15; 28(16):2129-36. PubMed ID: 22730436
    [Abstract] [Full Text] [Related]

  • 2. CUFID-query: accurate network querying through random walk based network flow estimation.
    Jeong H, Qian X, Yoon BJ.
    BMC Bioinformatics; 2017 Dec 28; 18(Suppl 14):500. PubMed ID: 29297279
    [Abstract] [Full Text] [Related]

  • 3. SEQUOIA: significance enhanced network querying through context-sensitive random walk and minimization of network conductance.
    Jeong H, Yoon BJ.
    BMC Syst Biol; 2017 Mar 14; 11(Suppl 3):20. PubMed ID: 28361708
    [Abstract] [Full Text] [Related]

  • 4. Effective comparative analysis of protein-protein interaction networks by measuring the steady-state network flow using a Markov model.
    Jeong H, Qian X, Yoon BJ.
    BMC Bioinformatics; 2016 Oct 06; 17(Suppl 13):395. PubMed ID: 27766938
    [Abstract] [Full Text] [Related]

  • 5. An efficient network querying method based on conditional random fields.
    Huang Q, Wu LY, Zhang XS.
    Bioinformatics; 2011 Nov 15; 27(22):3173-8. PubMed ID: 21926127
    [Abstract] [Full Text] [Related]

  • 6. SMETANA: accurate and scalable algorithm for probabilistic alignment of large-scale biological networks.
    Sahraeian SM, Yoon BJ.
    PLoS One; 2013 Nov 15; 8(7):e67995. PubMed ID: 23874484
    [Abstract] [Full Text] [Related]

  • 7. PrimAlign: PageRank-inspired Markovian alignment for large biological networks.
    Kalecky K, Cho YR.
    Bioinformatics; 2018 Jul 01; 34(13):i537-i546. PubMed ID: 29949962
    [Abstract] [Full Text] [Related]

  • 8. Accurate multiple network alignment through context-sensitive random walk.
    Jeong H, Yoon BJ.
    BMC Syst Biol; 2015 Jul 01; 9 Suppl 1(Suppl 1):S7. PubMed ID: 25707987
    [Abstract] [Full Text] [Related]

  • 9. APPAGATO: an APproximate PArallel and stochastic GrAph querying TOol for biological networks.
    Bonnici V, Busato F, Micale G, Bombieri N, Pulvirenti A, Giugno R.
    Bioinformatics; 2016 Jul 15; 32(14):2159-66. PubMed ID: 27153658
    [Abstract] [Full Text] [Related]

  • 10. Topology-free querying of protein interaction networks.
    Bruckner S, Hüffner F, Karp RM, Shamir R, Sharan R.
    J Comput Biol; 2010 Mar 15; 17(3):237-52. PubMed ID: 20377443
    [Abstract] [Full Text] [Related]

  • 11. Path matching and graph matching in biological networks.
    Yang Q, Sze SH.
    J Comput Biol; 2007 Mar 15; 14(1):56-67. PubMed ID: 17381346
    [Abstract] [Full Text] [Related]

  • 12. Querying pathways in protein interaction networks based on hidden Markov models.
    Qian X, Sze SH, Yoon BJ.
    J Comput Biol; 2009 Feb 15; 16(2):145-57. PubMed ID: 19193142
    [Abstract] [Full Text] [Related]

  • 13. Corbi: a new R package for biological network alignment and querying.
    Huang Q, Wu LY, Zhang XS.
    BMC Syst Biol; 2013 Feb 15; 7 Suppl 2(Suppl 2):S6. PubMed ID: 24565104
    [Abstract] [Full Text] [Related]

  • 14. RedNemo: topology-based PPI network reconstruction via repeated diffusion with neighborhood modifications.
    Alkan F, Erten C.
    Bioinformatics; 2017 Feb 15; 33(4):537-544. PubMed ID: 27797764
    [Abstract] [Full Text] [Related]

  • 15. Joint clustering of protein interaction networks through Markov random walk.
    Wang Y, Qian X.
    BMC Syst Biol; 2014 Feb 15; 8 Suppl 1(Suppl 1):S9. PubMed ID: 24565376
    [Abstract] [Full Text] [Related]

  • 16. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
    Alkan F, Erten C.
    Bioinformatics; 2015 Jul 15; 31(14):2356-63. PubMed ID: 25788620
    [Abstract] [Full Text] [Related]

  • 17. Biological network mapping and source signal deduction.
    Brynildsen MP, Wu TY, Jang SS, Liao JC.
    Bioinformatics; 2007 Jul 15; 23(14):1783-91. PubMed ID: 17495996
    [Abstract] [Full Text] [Related]

  • 18. QNet: a tool for querying protein interaction networks.
    Dost B, Shlomi T, Gupta N, Ruppin E, Bafna V, Sharan R.
    J Comput Biol; 2008 Sep 15; 15(7):913-25. PubMed ID: 18707533
    [Abstract] [Full Text] [Related]

  • 19. Global Biological Network Alignment by Using Efficient Memetic Algorithm.
    Maoguo Gong, Zhenglin Peng, Lijia Ma, Jiaxiang Huang.
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Nov 15; 13(6):1117-1129. PubMed ID: 28055895
    [Abstract] [Full Text] [Related]

  • 20. Enhancing gene regulatory network inference through data integration with markov random fields.
    Banf M, Rhee SY.
    Sci Rep; 2017 Feb 01; 7():41174. PubMed ID: 28145456
    [Abstract] [Full Text] [Related]

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