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Journal Abstract Search

177 related items for PubMed ID: 22759576

  • 21. Survey: Enhancing protein complex prediction in PPI networks with GO similarity weighting.
    Price T, Peña FI, Cho YR.
    Interdiscip Sci; 2013 Sep; 5(3):196-210. PubMed ID: 24307411
    [Abstract] [Full Text] [Related]

  • 22. Protein complex detection in PPI networks based on data integration and supervised learning method.
    Yu F, Yang Z, Hu X, Sun Y, Lin H, Wang J.
    BMC Bioinformatics; 2015 Sep; 16 Suppl 12(Suppl 12):S3. PubMed ID: 26329886
    [Abstract] [Full Text] [Related]

  • 23. Predicting overlapping protein complexes from weighted protein interaction graphs by gradually expanding dense neighborhoods.
    Dimitrakopoulos C, Theofilatos K, Pegkas A, Likothanassis S, Mavroudi S.
    Artif Intell Med; 2016 Jul; 71():62-9. PubMed ID: 27506132
    [Abstract] [Full Text] [Related]

  • 24. CPredictor3.0: detecting protein complexes from PPI networks with expression data and functional annotations.
    Xu Y, Zhou J, Zhou S, Guan J.
    BMC Syst Biol; 2017 Dec 21; 11(Suppl 7):135. PubMed ID: 29322927
    [Abstract] [Full Text] [Related]

  • 25. A relation based measure of semantic similarity for Gene Ontology annotations.
    Sheehan B, Quigley A, Gaudin B, Dobson S.
    BMC Bioinformatics; 2008 Nov 04; 9():468. PubMed ID: 18983678
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  • 26. Protein-protein interaction inference based on semantic similarity of Gene Ontology terms.
    Zhang SB, Tang QR.
    J Theor Biol; 2016 Jul 21; 401():30-7. PubMed ID: 27117309
    [Abstract] [Full Text] [Related]

  • 27. TopoICSim: a new semantic similarity measure based on gene ontology.
    Ehsani R, Drabløs F.
    BMC Bioinformatics; 2016 Jul 29; 17(1):296. PubMed ID: 27473391
    [Abstract] [Full Text] [Related]

  • 28. Dopcc: Detecting overlapping protein complexes via multi-metrics and co-core attachment method.
    Wang W, Meng X, Xiang J, Bedru HD, Li M.
    IEEE/ACM Trans Comput Biol Bioinform; 2024 Jul 17; PP():. PubMed ID: 39018215
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  • 29. Protein Complexes Prediction Method Based on Core-Attachment Structure and Functional Annotations.
    Li B, Liao B.
    Int J Mol Sci; 2017 Sep 06; 18(9):. PubMed ID: 28878201
    [Abstract] [Full Text] [Related]

  • 30. TransformerGO: predicting protein-protein interactions by modelling the attention between sets of gene ontology terms.
    Ieremie I, Ewing RM, Niranjan M.
    Bioinformatics; 2022 Apr 12; 38(8):2269-2277. PubMed ID: 35176146
    [Abstract] [Full Text] [Related]

  • 31. A New Method for Recognizing Protein Complexes Based on Protein Interaction Networks and GO Terms.
    Wang X, Zhang N, Zhao Y, Wang J.
    Front Genet; 2021 Apr 12; 12():792265. PubMed ID: 34966415
    [Abstract] [Full Text] [Related]

  • 32. Assessment of Semantic Similarity between Proteins Using Information Content and Topological Properties of the Gene Ontology Graph.
    Dutta P, Basu S, Kundu M.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 Apr 12; 15(3):839-849. PubMed ID: 28371781
    [Abstract] [Full Text] [Related]

  • 33. NoisyGOA: Noisy GO annotations prediction using taxonomic and semantic similarity.
    Lu C, Wang J, Zhang Z, Yang P, Yu G.
    Comput Biol Chem; 2016 Dec 12; 65():203-211. PubMed ID: 27670689
    [Abstract] [Full Text] [Related]

  • 34. MOEPGA: A novel method to detect protein complexes in yeast protein-protein interaction networks based on MultiObjective Evolutionary Programming Genetic Algorithm.
    Cao B, Luo J, Liang C, Wang S, Song D.
    Comput Biol Chem; 2015 Oct 12; 58():173-81. PubMed ID: 26298638
    [Abstract] [Full Text] [Related]

  • 35. GECluster: a novel protein complex prediction method.
    Su L, Liu G, Wang H, Tian Y, Zhou Z, Han L, Yan L.
    Biotechnol Biotechnol Equip; 2014 Jul 04; 28(4):753-761. PubMed ID: 26019559
    [Abstract] [Full Text] [Related]

  • 36. A novel method for identifying disease associated protein complexes based on functional similarity protein complex networks.
    Le DH.
    Algorithms Mol Biol; 2015 Jul 04; 10():14. PubMed ID: 25969691
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  • 37. A graph-based semantic similarity measure for the gene ontology.
    Alvarez MA, Yan C.
    J Bioinform Comput Biol; 2011 Dec 04; 9(6):681-95. PubMed ID: 22084008
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  • 38. Construction of ontology augmented networks for protein complex prediction.
    Zhang Y, Lin H, Yang Z, Wang J.
    PLoS One; 2013 Dec 04; 8(5):e62077. PubMed ID: 23650509
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  • 39. GO functional similarity clustering depends on similarity measure, clustering method, and annotation completeness.
    Liu M, Thomas PD.
    BMC Bioinformatics; 2019 Mar 27; 20(1):155. PubMed ID: 30917779
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  • 40. Evaluation of gene ontology semantic similarities on protein interaction datasets.
    Chen G, Li J, Wang J.
    Int J Bioinform Res Appl; 2013 Mar 27; 9(2):173-83. PubMed ID: 23467062
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