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Journal Abstract Search

118 related items for PubMed ID: 22771297

  • 1. Protein complex prediction based on maximum matching with domain-domain interaction.
    Ma W, McAnulla C, Wang L.
    Biochim Biophys Acta; 2012 Dec; 1824(12):1418-24. PubMed ID: 22771297
    [Abstract] [Full Text] [Related]

  • 2. Protein complex prediction via verifying and reconstructing the topology of domain-domain interactions.
    Ozawa Y, Saito R, Fujimori S, Kashima H, Ishizaka M, Yanagawa H, Miyamoto-Sato E, Tomita M.
    BMC Bioinformatics; 2010 Jun 28; 11():350. PubMed ID: 20584269
    [Abstract] [Full Text] [Related]

  • 3. Protein complex prediction via improved verification methods using constrained domain-domain matching.
    Zhao Y, Hayashida M, Nacher JC, Nagamochi H, Akutsu T.
    Int J Bioinform Res Appl; 2012 Jun 28; 8(3-4):210-27. PubMed ID: 22961452
    [Abstract] [Full Text] [Related]

  • 4. Predicting domain-domain interaction based on domain profiles with feature selection and support vector machines.
    González AJ, Liao L.
    BMC Bioinformatics; 2010 Oct 29; 11():537. PubMed ID: 21034480
    [Abstract] [Full Text] [Related]

  • 5. A density-based clustering approach for identifying overlapping protein complexes with functional preferences.
    Hu L, Chan KC.
    BMC Bioinformatics; 2015 May 27; 16():174. PubMed ID: 26013799
    [Abstract] [Full Text] [Related]

  • 6. Evaluation of clustering algorithms for protein-protein interaction networks.
    Brohée S, van Helden J.
    BMC Bioinformatics; 2006 Nov 06; 7():488. PubMed ID: 17087821
    [Abstract] [Full Text] [Related]

  • 7. Applications of domain-domain interactions in pathway study.
    Ng KL, Huang CH, Liu HC, Liu HC.
    Comput Biol Chem; 2008 Apr 06; 32(2):81-7. PubMed ID: 18082454
    [Abstract] [Full Text] [Related]

  • 8. A computational model for predicting protein interactions based on multidomain collaboration.
    Jang WH, Jung SH, Han DS.
    IEEE/ACM Trans Comput Biol Bioinform; 2012 Apr 06; 9(4):1081-90. PubMed ID: 22508910
    [Abstract] [Full Text] [Related]

  • 9. Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering.
    Theofilatos K, Pavlopoulou N, Papasavvas C, Likothanassis S, Dimitrakopoulos C, Georgopoulos E, Moschopoulos C, Mavroudi S.
    Artif Intell Med; 2015 Mar 06; 63(3):181-9. PubMed ID: 25765008
    [Abstract] [Full Text] [Related]

  • 10. Detection of protein complexes using a protein ranking algorithm.
    Zaki N, Berengueres J, Efimov D.
    Proteins; 2012 Oct 06; 80(10):2459-68. PubMed ID: 22685080
    [Abstract] [Full Text] [Related]

  • 11. Knowledge-guided inference of domain-domain interactions from incomplete protein-protein interaction networks.
    Liu M, Chen XW, Jothi R.
    Bioinformatics; 2009 Oct 01; 25(19):2492-9. PubMed ID: 19667081
    [Abstract] [Full Text] [Related]

  • 12. Prediction of contact matrix for protein-protein interaction.
    González AJ, Liao L, Wu CH.
    Bioinformatics; 2013 Apr 15; 29(8):1018-25. PubMed ID: 23418186
    [Abstract] [Full Text] [Related]

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  • 14. A discriminative approach for identifying domain-domain interactions from protein-protein interactions.
    Zhao XM, Chen L, Aihara K.
    Proteins; 2010 Apr 15; 78(5):1243-53. PubMed ID: 20027642
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  • 16. Evaluation of different domain-based methods in protein interaction prediction.
    Ta HX, Holm L.
    Biochem Biophys Res Commun; 2009 Dec 18; 390(3):357-62. PubMed ID: 19800868
    [Abstract] [Full Text] [Related]

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  • 18. Discovering signal transduction networks using signaling domain-domain interactions.
    Nguyen TP, Ho TB.
    Genome Inform; 2006 Dec 18; 17(2):35-45. PubMed ID: 17503377
    [Abstract] [Full Text] [Related]

  • 19. Protein docking using case-based reasoning.
    Ghoorah AW, Devignes MD, Smaïl-Tabbone M, Ritchie DW.
    Proteins; 2013 Dec 18; 81(12):2150-8. PubMed ID: 24123156
    [Abstract] [Full Text] [Related]

  • 20. Finding low-conductance sets with dense interactions (FLCD) for better protein complex prediction.
    Wang Y, Qian X.
    BMC Syst Biol; 2017 Mar 14; 11(Suppl 3):22. PubMed ID: 28361714
    [Abstract] [Full Text] [Related]

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