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Journal Abstract Search

271 related items for PubMed ID: 22845868

  • 1. Computational framework for analysis of prey-prey associations in interaction proteomics identifies novel human protein-protein interactions and networks.
    Saha S, Dazard JE, Xu H, Ewing RM.
    J Proteome Res; 2012 Sep 07; 11(9):4476-87. PubMed ID: 22845868
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  • 2. ROCS: a reproducibility index and confidence score for interaction proteomics studies.
    Dazard JE, Saha S, Ewing RM.
    BMC Bioinformatics; 2012 Jun 08; 13():128. PubMed ID: 22682516
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  • 7. Analysis of protein complexes through model-based biclustering of label-free quantitative AP-MS data.
    Choi H, Kim S, Gingras AC, Nesvizhskii AI.
    Mol Syst Biol; 2010 Jun 22; 6():385. PubMed ID: 20571534
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  • 8. Computational detection of protein complexes in AP-MS experiments.
    Choi H.
    Proteomics; 2012 May 22; 12(10):1663-8. PubMed ID: 22711593
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  • 9. A two-step framework for inferring direct protein-protein interaction network from AP-MS data.
    Tian B, Zhao C, Gu F, He Z.
    BMC Syst Biol; 2017 Sep 21; 11(Suppl 4):82. PubMed ID: 28950876
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  • 10. BioPlex Display: An Interactive Suite for Large-Scale AP-MS Protein-Protein Interaction Data.
    Schweppe DK, Huttlin EL, Harper JW, Gygi SP.
    J Proteome Res; 2018 Jan 05; 17(1):722-726. PubMed ID: 29054129
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  • 11. Mapping Protein-Protein Interactions Using Affinity Purification and Mass Spectrometry.
    Lee CM, Adamchek C, Feke A, Nusinow DA, Gendron JM.
    Methods Mol Biol; 2017 Jan 05; 1610():231-249. PubMed ID: 28439867
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  • 12. SAINT-MS1: protein-protein interaction scoring using label-free intensity data in affinity purification-mass spectrometry experiments.
    Choi H, Glatter T, Gstaiger M, Nesvizhskii AI.
    J Proteome Res; 2012 Apr 06; 11(4):2619-24. PubMed ID: 22352807
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  • 13. A sampling framework for incorporating quantitative mass spectrometry data in protein interaction analysis.
    Tucker G, Loh PR, Berger B.
    BMC Bioinformatics; 2013 Oct 04; 14():299. PubMed ID: 24093595
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  • 15. Parallel Exploration of Interaction Space by BioID and Affinity Purification Coupled to Mass Spectrometry.
    Hesketh GG, Youn JY, Samavarchi-Tehrani P, Raught B, Gingras AC.
    Methods Mol Biol; 2017 Oct 04; 1550():115-136. PubMed ID: 28188527
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  • 17. An analysis pipeline for the inference of protein-protein interaction networks.
    Taylor RC, Singhal M, Daly DS, Gilmore J, Cannon WR, Domico K, White AM, Auberry DL, Auberry KJ, Hooker BS, Hurst G, McDermott JE, McDonald WH, Pelletier DA, Schmoyer D, Wiley HS.
    Int J Data Min Bioinform; 2009 Oct 04; 3(4):409-30. PubMed ID: 20052905
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  • 19. From Affinity to Proximity Techniques to Investigate Protein Complexes in Plants.
    Kerbler SM, Natale R, Fernie AR, Zhang Y.
    Int J Mol Sci; 2021 Jul 01; 22(13):. PubMed ID: 34281155
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  • 20. From pathways to networks: connecting dots by establishing protein-protein interaction networks in signaling pathways using affinity purification and mass spectrometry.
    Li X, Wang W, Chen J.
    Proteomics; 2015 Jan 01; 15(2-3):188-202. PubMed ID: 25137225
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