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Journal Abstract Search

140 related items for PubMed ID: 22849342

  • 1. Large-scale transcriptome characterization and mass discovery of SNPs in globe artichoke and its related taxa.
    Scaglione D, Lanteri S, Acquadro A, Lai Z, Knapp SJ, Rieseberg L, Portis E.
    Plant Biotechnol J; 2012 Oct; 10(8):956-69. PubMed ID: 22849342
    [Abstract] [Full Text] [Related]

  • 2. Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome.
    Azam S, Thakur V, Ruperao P, Shah T, Balaji J, Amindala B, Farmer AD, Studholme DJ, May GD, Edwards D, Jones JD, Varshney RK.
    Am J Bot; 2012 Feb; 99(2):186-92. PubMed ID: 22301893
    [Abstract] [Full Text] [Related]

  • 3. Population structure of Cynara cardunculus complex and the origin of the conspecific crops artichoke and cardoon.
    Gatto A, De Paola D, Bagnoli F, Vendramin GG, Sonnante G.
    Ann Bot; 2013 Sep; 112(5):855-65. PubMed ID: 23877076
    [Abstract] [Full Text] [Related]

  • 4. Genotyping-by-sequencing highlights patterns of genetic structure and domestication in artichoke and cardoon.
    Pavan S, Curci PL, Zuluaga DL, Blanco E, Sonnante G.
    PLoS One; 2018 Sep; 13(10):e0205988. PubMed ID: 30352087
    [Abstract] [Full Text] [Related]

  • 5. The genome sequence of the outbreeding globe artichoke constructed de novo incorporating a phase-aware low-pass sequencing strategy of F1 progeny.
    Scaglione D, Reyes-Chin-Wo S, Acquadro A, Froenicke L, Portis E, Beitel C, Tirone M, Mauro R, Lo Monaco A, Mauromicale G, Faccioli P, Cattivelli L, Rieseberg L, Michelmore R, Lanteri S.
    Sci Rep; 2016 Jan 20; 6():19427. PubMed ID: 26786968
    [Abstract] [Full Text] [Related]

  • 6. Genome reconstruction in Cynara cardunculus taxa gains access to chromosome-scale DNA variation.
    Acquadro A, Barchi L, Portis E, Mangino G, Valentino D, Mauromicale G, Lanteri S.
    Sci Rep; 2017 Jul 17; 7(1):5617. PubMed ID: 28717205
    [Abstract] [Full Text] [Related]

  • 7. Genetic mapping and identification of QTL for earliness in the globe artichoke/cultivated cardoon complex.
    Portis E, Scaglione D, Acquadro A, Mauromicale G, Mauro R, Knapp SJ, Lanteri S.
    BMC Res Notes; 2012 May 23; 5():252. PubMed ID: 22621324
    [Abstract] [Full Text] [Related]

  • 8. Development and characterization of microsatellite markers in Cynara cardunculus L.
    Acquadro A, Portis E, Lee D, Donini P, Lanteri S.
    Genome; 2005 Apr 23; 48(2):217-25. PubMed ID: 15838543
    [Abstract] [Full Text] [Related]

  • 9. Amplified fragment length polymorphism for genetic diversity assessment in globe artichoke.
    Lanteri S, Saba E, Cadinu M, Mallica GM, Baghino L, Portis E.
    Theor Appl Genet; 2004 May 23; 108(8):1534-44. PubMed ID: 14968303
    [Abstract] [Full Text] [Related]

  • 10. Genetic mapping and annotation of genomic microsatellites isolated from globe artichoke.
    Acquadro A, Lanteri S, Scaglione D, Arens P, Vosman B, Portis E.
    Theor Appl Genet; 2009 May 23; 118(8):1573-87. PubMed ID: 19326092
    [Abstract] [Full Text] [Related]

  • 11. RAD tag sequencing as a source of SNP markers in Cynara cardunculus L.
    Scaglione D, Acquadro A, Portis E, Tirone M, Knapp SJ, Lanteri S.
    BMC Genomics; 2012 Jan 03; 13():3. PubMed ID: 22214349
    [Abstract] [Full Text] [Related]

  • 12. Ontology and diversity of transcript-associated microsatellites mined from a globe artichoke EST database.
    Scaglione D, Acquadro A, Portis E, Taylor CA, Lanteri S, Knapp SJ.
    BMC Genomics; 2009 Sep 28; 10():454. PubMed ID: 19785740
    [Abstract] [Full Text] [Related]

  • 13. Orthology Guided Assembly in highly heterozygous crops: creating a reference transcriptome to uncover genetic diversity in Lolium perenne.
    Ruttink T, Sterck L, Rohde A, Bendixen C, Rouzé P, Asp T, Van de Peer Y, Roldan-Ruiz I.
    Plant Biotechnol J; 2013 Jun 28; 11(5):605-17. PubMed ID: 23433242
    [Abstract] [Full Text] [Related]

  • 14. Discovery of a large set of SNP and SSR genetic markers by high-throughput sequencing of pepper (Capsicum annuum).
    Nicolaï M, Pisani C, Bouchet JP, Vuylsteke M, Palloix A.
    Genet Mol Res; 2012 Aug 13; 11(3):2295-300. PubMed ID: 22911599
    [Abstract] [Full Text] [Related]

  • 15. SNP discovery by illumina-based transcriptome sequencing of the olive and the genetic characterization of Turkish olive genotypes revealed by AFLP, SSR and SNP markers.
    Kaya HB, Cetin O, Kaya H, Sahin M, Sefer F, Kahraman A, Tanyolac B.
    PLoS One; 2013 Aug 13; 8(9):e73674. PubMed ID: 24058483
    [Abstract] [Full Text] [Related]

  • 16. De novo sequencing and assembly of Centella asiatica leaf transcriptome for mapping of structural, functional and regulatory genes with special reference to secondary metabolism.
    Sangwan RS, Tripathi S, Singh J, Narnoliya LK, Sangwan NS.
    Gene; 2013 Aug 01; 525(1):58-76. PubMed ID: 23644021
    [Abstract] [Full Text] [Related]

  • 17. The Dark Side of the pollen: BSA-seq identified genomic regions linked to male sterility in globe artichoke.
    Martina M, Zayas A, Portis E, Di Nardo G, Polli MF, Comino C, Gilardi G, Martin E, Acquadro A.
    BMC Plant Biol; 2024 May 17; 24(1):415. PubMed ID: 38760683
    [Abstract] [Full Text] [Related]

  • 18. Enrichment of genomic DNA for polymorphism detection in a non-model highly polyploid crop plant.
    Bundock PC, Casu RE, Henry RJ.
    Plant Biotechnol J; 2012 Aug 17; 10(6):657-67. PubMed ID: 22624722
    [Abstract] [Full Text] [Related]

  • 19. Construction of a reference molecular linkage map of globe artichoke (Cynara cardunculus var. scolymus).
    Portis E, Mauromicale G, Mauro R, Acquadro A, Scaglione D, Lanteri S.
    Theor Appl Genet; 2009 Dec 17; 120(1):59-70. PubMed ID: 19787331
    [Abstract] [Full Text] [Related]

  • 20. A Genome-Wide Survey of the Microsatellite Content of the Globe Artichoke Genome and the Development of a Web-Based Database.
    Portis E, Portis F, Valente L, Moglia A, Barchi L, Lanteri S, Acquadro A.
    PLoS One; 2016 Dec 17; 11(9):e0162841. PubMed ID: 27648830
    [Abstract] [Full Text] [Related]

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