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329 related items for PubMed ID: 22942281

  • 1. Differentiation of the DnaA-oriC subcomplex for DNA unwinding in a replication initiation complex.
    Ozaki S, Noguchi Y, Hayashi Y, Miyazaki E, Katayama T.
    J Biol Chem; 2012 Oct 26; 287(44):37458-71. PubMed ID: 22942281
    [Abstract] [Full Text] [Related]

  • 2. A common mechanism for the ATP-DnaA-dependent formation of open complexes at the replication origin.
    Ozaki S, Kawakami H, Nakamura K, Fujikawa N, Kagawa W, Park SY, Yokoyama S, Kurumizaka H, Katayama T.
    J Biol Chem; 2008 Mar 28; 283(13):8351-62. PubMed ID: 18216012
    [Abstract] [Full Text] [Related]

  • 3. The interaction of DiaA and DnaA regulates the replication cycle in E. coli by directly promoting ATP DnaA-specific initiation complexes.
    Keyamura K, Fujikawa N, Ishida T, Ozaki S, Su'etsugu M, Fujimitsu K, Kagawa W, Yokoyama S, Kurumizaka H, Katayama T.
    Genes Dev; 2007 Aug 15; 21(16):2083-99. PubMed ID: 17699754
    [Abstract] [Full Text] [Related]

  • 4. Concerted actions of DnaA complexes with DNA-unwinding sequences within and flanking replication origin oriC promote DnaB helicase loading.
    Sakiyama Y, Nagata M, Yoshida R, Kasho K, Ozaki S, Katayama T.
    J Biol Chem; 2022 Jun 15; 298(6):102051. PubMed ID: 35598828
    [Abstract] [Full Text] [Related]

  • 5. Near-atomic structural model for bacterial DNA replication initiation complex and its functional insights.
    Shimizu M, Noguchi Y, Sakiyama Y, Kawakami H, Katayama T, Takada S.
    Proc Natl Acad Sci U S A; 2016 Dec 13; 113(50):E8021-E8030. PubMed ID: 27911788
    [Abstract] [Full Text] [Related]

  • 6. Formation of an ATP-DnaA-specific initiation complex requires DnaA Arginine 285, a conserved motif in the AAA+ protein family.
    Kawakami H, Keyamura K, Katayama T.
    J Biol Chem; 2005 Jul 22; 280(29):27420-30. PubMed ID: 15901724
    [Abstract] [Full Text] [Related]

  • 7. Highly organized DnaA-oriC complexes recruit the single-stranded DNA for replication initiation.
    Ozaki S, Katayama T.
    Nucleic Acids Res; 2012 Feb 22; 40(4):1648-65. PubMed ID: 22053082
    [Abstract] [Full Text] [Related]

  • 8. DnaA Protein of Escherichia coli: oligomerization at the E. coli chromosomal origin is required for initiation and involves specific N-terminal amino acids.
    Simmons LA, Felczak M, Kaguni JM.
    Mol Microbiol; 2003 Aug 22; 49(3):849-58. PubMed ID: 12864864
    [Abstract] [Full Text] [Related]

  • 9. Structure and function of DnaA N-terminal domains: specific sites and mechanisms in inter-DnaA interaction and in DnaB helicase loading on oriC.
    Abe Y, Jo T, Matsuda Y, Matsunaga C, Katayama T, Ueda T.
    J Biol Chem; 2007 Jun 15; 282(24):17816-27. PubMed ID: 17420252
    [Abstract] [Full Text] [Related]

  • 10. The Arg Fingers of Key DnaA Protomers Are Oriented Inward within the Replication Origin oriC and Stimulate DnaA Subcomplexes in the Initiation Complex.
    Noguchi Y, Sakiyama Y, Kawakami H, Katayama T.
    J Biol Chem; 2015 Aug 14; 290(33):20295-312. PubMed ID: 26126826
    [Abstract] [Full Text] [Related]

  • 11. Thermotoga maritima oriC involves a DNA unwinding element with distinct modules and a DnaA-oligomerizing region with a novel directional binding mode.
    Lu C, Yoshida R, Katayama T, Ozaki S.
    J Biol Chem; 2023 Jul 14; 299(7):104888. PubMed ID: 37276959
    [Abstract] [Full Text] [Related]

  • 12. The DnaA homolog of the hyperthermophilic eubacterium Thermotoga maritima forms an open complex with a minimal 149-bp origin region in an ATP-dependent manner.
    Ozaki S, Fujimitsu K, Kurumizaka H, Katayama T.
    Genes Cells; 2006 Apr 14; 11(4):425-38. PubMed ID: 16611245
    [Abstract] [Full Text] [Related]

  • 13. DnaA protein DNA-binding domain binds to Hda protein to promote inter-AAA+ domain interaction involved in regulatory inactivation of DnaA.
    Keyamura K, Katayama T.
    J Biol Chem; 2011 Aug 19; 286(33):29336-29346. PubMed ID: 21708944
    [Abstract] [Full Text] [Related]

  • 14. Single-stranded DNA recruitment mechanism in replication origin unwinding by DnaA initiator protein and HU, an evolutionary ubiquitous nucleoid protein.
    Yoshida R, Ozaki S, Kawakami H, Katayama T.
    Nucleic Acids Res; 2023 Jul 07; 51(12):6286-6306. PubMed ID: 37178000
    [Abstract] [Full Text] [Related]

  • 15. The box VII motif of Escherichia coli DnaA protein is required for DnaA oligomerization at the E. coli replication origin.
    Felczak MM, Kaguni JM.
    J Biol Chem; 2004 Dec 03; 279(49):51156-62. PubMed ID: 15371441
    [Abstract] [Full Text] [Related]

  • 16. Topological characterization of the DnaA-oriC complex using single-molecule nanomanipuation.
    Zorman S, Seitz H, Sclavi B, Strick TR.
    Nucleic Acids Res; 2012 Aug 03; 40(15):7375-83. PubMed ID: 22581769
    [Abstract] [Full Text] [Related]

  • 17. DiaA dynamics are coupled with changes in initial origin complexes leading to helicase loading.
    Keyamura K, Abe Y, Higashi M, Ueda T, Katayama T.
    J Biol Chem; 2009 Sep 11; 284(37):25038-50. PubMed ID: 19632993
    [Abstract] [Full Text] [Related]

  • 18. DnaA structure, function, and dynamics in the initiation at the chromosomal origin.
    Ozaki S, Katayama T.
    Plasmid; 2009 Sep 11; 62(2):71-82. PubMed ID: 19527752
    [Abstract] [Full Text] [Related]

  • 19. Initiation of DNA Replication at the Chromosomal Origin of E. coli, oriC.
    Katayama T.
    Adv Exp Med Biol; 2017 Sep 11; 1042():79-98. PubMed ID: 29357054
    [Abstract] [Full Text] [Related]

  • 20. Bacterial replication initiator DnaA. Rules for DnaA binding and roles of DnaA in origin unwinding and helicase loading.
    Messer W, Blaesing F, Jakimowicz D, Krause M, Majka J, Nardmann J, Schaper S, Seitz H, Speck C, Weigel C, Wegrzyn G, Welzeck M, Zakrzewska-Czerwinska J.
    Biochimie; 2001 Jan 11; 83(1):5-12. PubMed ID: 11254968
    [Abstract] [Full Text] [Related]

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