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Journal Abstract Search

289 related items for PubMed ID: 22955967

  • 1. Identification of hierarchical and overlapping functional modules in PPI networks.
    Wang J, Ren J, Li M, Wu FX.
    IEEE Trans Nanobioscience; 2012 Dec; 11(4):386-93. PubMed ID: 22955967
    [Abstract] [Full Text] [Related]

  • 2. Identifying hierarchical and overlapping protein complexes based on essential protein-protein interactions and "seed-expanding" method.
    Ren J, Zhou W, Wang J.
    Biomed Res Int; 2014 Dec; 2014():838714. PubMed ID: 25143945
    [Abstract] [Full Text] [Related]

  • 3. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
    Yu L, Gao L, Li K, Zhao Y, Chiu DK.
    Comput Biol Chem; 2011 Oct 12; 35(5):298-307. PubMed ID: 22000801
    [Abstract] [Full Text] [Related]

  • 4. A fast hierarchical clustering algorithm for functional modules discovery in protein interaction networks.
    Wang J, Li M, Chen J, Pan Y.
    IEEE/ACM Trans Comput Biol Bioinform; 2011 Oct 12; 8(3):607-20. PubMed ID: 20733244
    [Abstract] [Full Text] [Related]

  • 5. Detection of functional modules from protein interaction networks with an enhanced random walk based algorithm.
    Cai B, Wang H, Zheng H, Wang H.
    Int J Comput Biol Drug Des; 2011 Oct 12; 4(3):290-306. PubMed ID: 21778561
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  • 6. Identification of functional modules in a PPI network by clique percolation clustering.
    Zhang S, Ning X, Zhang XS.
    Comput Biol Chem; 2006 Dec 12; 30(6):445-51. PubMed ID: 17098476
    [Abstract] [Full Text] [Related]

  • 7. Protein complex prediction via cost-based clustering.
    King AD, Przulj N, Jurisica I.
    Bioinformatics; 2004 Nov 22; 20(17):3013-20. PubMed ID: 15180928
    [Abstract] [Full Text] [Related]

  • 8. Spotlight: assembly of protein complexes by integrating graph clustering methods.
    Chin CH, Chen SH, Chen CY, Hsiung CA, Ho CW, Ko MT, Lin CY.
    Gene; 2013 Apr 10; 518(1):42-51. PubMed ID: 23274651
    [Abstract] [Full Text] [Related]

  • 9. The relative vertex clustering value--a new criterion for the fast discovery of functional modules in protein interaction networks.
    Ibrahim ZM, Ngom A.
    BMC Bioinformatics; 2015 Apr 10; 16 Suppl 4(Suppl 4):S3. PubMed ID: 25734691
    [Abstract] [Full Text] [Related]

  • 10. Combining functional and topological properties to identify core modules in protein interaction networks.
    Lubovac Z, Gamalielsson J, Olsson B.
    Proteins; 2006 Sep 01; 64(4):948-59. PubMed ID: 16794996
    [Abstract] [Full Text] [Related]

  • 11. Identification of core-attachment complexes based on maximal frequent patterns in protein-protein interaction networks.
    Yu L, Gao L, Kong C.
    Proteomics; 2011 Oct 01; 11(19):3826-34. PubMed ID: 21761565
    [Abstract] [Full Text] [Related]

  • 12. Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data.
    Li M, Wu X, Wang J, Pan Y.
    BMC Bioinformatics; 2012 May 23; 13():109. PubMed ID: 22621308
    [Abstract] [Full Text] [Related]

  • 13. A novel protein complex identification algorithm based on Connected Affinity Clique Extension (CACE).
    Li P, He T, Hu X, Zhao J, Shen X, Zhang M, Wang Y.
    IEEE Trans Nanobioscience; 2014 Jun 23; 13(2):89-96. PubMed ID: 24803142
    [Abstract] [Full Text] [Related]

  • 14. MOEPGA: A novel method to detect protein complexes in yeast protein-protein interaction networks based on MultiObjective Evolutionary Programming Genetic Algorithm.
    Cao B, Luo J, Liang C, Wang S, Song D.
    Comput Biol Chem; 2015 Oct 23; 58():173-81. PubMed ID: 26298638
    [Abstract] [Full Text] [Related]

  • 15. hF-measure: A new measurement for evaluating clusters in protein-protein interaction networks.
    Li M, Wu X, Pan Y, Wang J.
    Proteomics; 2013 Jan 23; 13(2):291-300. PubMed ID: 23193073
    [Abstract] [Full Text] [Related]

  • 16. Detecting functional modules in the yeast protein-protein interaction network.
    Chen J, Yuan B.
    Bioinformatics; 2006 Sep 15; 22(18):2283-90. PubMed ID: 16837529
    [Abstract] [Full Text] [Related]

  • 17. Functional module identification in protein interaction networks by interaction patterns.
    Wang Y, Qian X.
    Bioinformatics; 2014 Jan 01; 30(1):81-93. PubMed ID: 24085567
    [Abstract] [Full Text] [Related]

  • 18. C-element: a new clustering algorithm to find high quality functional modules in PPI networks.
    Ghasemi M, Rahgozar M, Bidkhori G, Masoudi-Nejad A.
    PLoS One; 2013 Jan 01; 8(9):e72366. PubMed ID: 24039752
    [Abstract] [Full Text] [Related]

  • 19. Mining Dense Overlapping Subgraphs in weighted protein-protein interaction networks.
    Lee AJ, Lin MC, Hsu CM.
    Biosystems; 2011 Mar 01; 103(3):392-9. PubMed ID: 21095218
    [Abstract] [Full Text] [Related]

  • 20. Clustering and overlapping modules detection in PPI network based on IBFO.
    Lei X, Wu S, Ge L, Zhang A.
    Proteomics; 2013 Jan 01; 13(2):278-90. PubMed ID: 23229795
    [Abstract] [Full Text] [Related]

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