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Journal Abstract Search

321 related items for PubMed ID: 23071097

  • 21. Detection of overlapping protein complexes in gene expression, phenotype and pathways of Saccharomyces cerevisiae using Prorank based Fuzzy algorithm.
    Manikandan P, Ramyachitra D, Banupriya D.
    Gene; 2016 Apr 15; 580(2):144-158. PubMed ID: 26809099
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  • 22. Evaluation of clustering algorithms for protein-protein interaction networks.
    Brohée S, van Helden J.
    BMC Bioinformatics; 2006 Nov 06; 7():488. PubMed ID: 17087821
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  • 23. Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering.
    Theofilatos K, Pavlopoulou N, Papasavvas C, Likothanassis S, Dimitrakopoulos C, Georgopoulos E, Moschopoulos C, Mavroudi S.
    Artif Intell Med; 2015 Mar 06; 63(3):181-9. PubMed ID: 25765008
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  • 24. Extracting high confidence protein interactions from affinity purification data: at the crossroads.
    Pu S, Vlasblom J, Turinsky A, Marcon E, Phanse S, Trimble SS, Olsen J, Greenblatt J, Emili A, Wodak SJ.
    J Proteomics; 2015 Apr 06; 118():63-80. PubMed ID: 25782749
    [Abstract] [Full Text] [Related]

  • 25. Analyzing protein-protein interactions from affinity purification-mass spectrometry data with SAINT.
    Choi H, Liu G, Mellacheruvu D, Tyers M, Gingras AC, Nesvizhskii AI.
    Curr Protoc Bioinformatics; 2012 Sep 06; Chapter 8():8.15.1-8.15.23. PubMed ID: 22948729
    [Abstract] [Full Text] [Related]

  • 26. Reinforce: An Ensemble Approach for Inferring PPI Network from AP-MS Data.
    Tian B, Duan Q, Zhao C, Teng B, He Z.
    IEEE/ACM Trans Comput Biol Bioinform; 2019 Sep 06; 16(2):365-376. PubMed ID: 28534782
    [Abstract] [Full Text] [Related]

  • 27. Inferring physical protein contacts from large-scale purification data of protein complexes.
    Schelhorn SE, Mestre J, Albrecht M, Zotenko E.
    Mol Cell Proteomics; 2011 Jun 06; 10(6):M110.004929. PubMed ID: 21451165
    [Abstract] [Full Text] [Related]

  • 28. From pull-down data to protein interaction networks and complexes with biological relevance.
    Zhang B, Park BH, Karpinets T, Samatova NF.
    Bioinformatics; 2008 Apr 01; 24(7):979-86. PubMed ID: 18304937
    [Abstract] [Full Text] [Related]

  • 29. Increasing confidence of protein interactomes using network topological metrics.
    Chen J, Hsu W, Lee ML, Ng SK.
    Bioinformatics; 2006 Aug 15; 22(16):1998-2004. PubMed ID: 16787971
    [Abstract] [Full Text] [Related]

  • 30. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
    Xu B, Guan J.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Aug 15; 11(4):616-27. PubMed ID: 26356332
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  • 35. Protein complex detection using interaction reliability assessment and weighted clustering coefficient.
    Zaki N, Efimov D, Berengueres J.
    BMC Bioinformatics; 2013 May 20; 14():163. PubMed ID: 23688127
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  • 38. Analysis of protein complexes through model-based biclustering of label-free quantitative AP-MS data.
    Choi H, Kim S, Gingras AC, Nesvizhskii AI.
    Mol Syst Biol; 2010 Jun 22; 6():385. PubMed ID: 20571534
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