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Journal Abstract Search

249 related items for PubMed ID: 23073221

  • 1. Structural significance of hypermodified nucleic acid base hydroxywybutine (OHyW) which occur at 37th position in the anticodon loop of yeast tRNA(Phe).
    Kumbhar NM, Kumbhar BV, Sonawane KD.
    J Mol Graph Model; 2012 Sep; 38():174-85. PubMed ID: 23073221
    [Abstract] [Full Text] [Related]

  • 2. Iso-energetic multiple conformations of hypermodified nucleic acid base wybutine (yW) which occur at 37(th) position in anticodon loop of tRNA(Phe).
    Kumbhar NM, Sonawane KD.
    J Mol Graph Model; 2011 Jun; 29(7):935-46. PubMed ID: 21530341
    [Abstract] [Full Text] [Related]

  • 3. Conformational preferences of modified nucleoside N(4)-acetylcytidine, ac4C occur at "wobble" 34th position in the anticodon loop of tRNA.
    Kumbhar BV, Kamble AD, Sonawane KD.
    Cell Biochem Biophys; 2013 Jul; 66(3):797-816. PubMed ID: 23408308
    [Abstract] [Full Text] [Related]

  • 4. Conformational preferences and structural analysis of hypermodified nucleoside, peroxywybutosine (o2yW) found at 37th position in anticodon loop of tRNAPhe and its role in modulating UUC codon-anticodon interactions.
    Fandilolu PM, Kamble AS, Sambhare SB, Sonawane KD.
    Gene; 2018 Jan 30; 641():310-325. PubMed ID: 29107006
    [Abstract] [Full Text] [Related]

  • 5. Conformational preferences of hypermodified nucleoside lysidine (k2C) occurring at "wobble" position in anticodon loop of tRNA(Ile).
    Sonawane KD, Tewari R.
    Nucleosides Nucleotides Nucleic Acids; 2008 Oct 30; 27(10):1158-74. PubMed ID: 18788046
    [Abstract] [Full Text] [Related]

  • 6. Conformational Preferences of Modified Nucleoside 5-Taurinomethyluridine, τm(5)U Occur at 'wobble' 34th Position in the Anticodon Loop of tRNA.
    Kamble AS, Kumbhar BV, Sambhare SB, Bavi RS, Sonawane KD.
    Cell Biochem Biophys; 2015 Apr 30; 71(3):1589-603. PubMed ID: 25388845
    [Abstract] [Full Text] [Related]

  • 7. Conformational preferences of anticodon 3'-adjacent hypermodified nucleic acid base cis-or trans-zeatin and its 2-methylthio derivative, cis-or trans- ms(2)zeatin.
    Sonawane KD, Sonavane UB, Tewari R.
    J Biomol Struct Dyn; 2002 Feb 30; 19(4):637-48. PubMed ID: 11843625
    [Abstract] [Full Text] [Related]

  • 8. Conformational preferences of the base substituent in hypermodified nucleotide queuosine 5'-monophosphate 'pQ' and protonated variant 'pQH+'.
    Sonavane UB, Sonawane KD, Tewari R.
    J Biomol Struct Dyn; 2002 Dec 30; 20(3):473-85. PubMed ID: 12437386
    [Abstract] [Full Text] [Related]

  • 9. Structural Significance of Conformational Preferences and Ribose-Ring-Puckering of Hyper Modified Nucleotide 5'-Monophosphate 2-Methylthio Cyclic N6-Threonylcarbamoyladenosine (p-ms2ct6A) Present at 37th Position in Anticodon Loop of tRNALys.
    Dound AS, Fandilolu PM, Sonawane KD.
    Cell Biochem Biophys; 2022 Dec 30; 80(4):665-680. PubMed ID: 35965304
    [Abstract] [Full Text] [Related]

  • 10. Solution conformations of unmodified and A(37)N(6)-dimethylallyl modified anticodon stem-loops of Escherichia coli tRNA(Phe).
    Cabello-Villegas J, Winkler ME, Nikonowicz EP.
    J Mol Biol; 2002 Jun 21; 319(5):1015-34. PubMed ID: 12079344
    [Abstract] [Full Text] [Related]

  • 11. Molecular dynamics of the anticodon domain of yeast tRNA(Phe): codon-anticodon interaction.
    Lahiri A, Nilsson L.
    Biophys J; 2000 Nov 21; 79(5):2276-89. PubMed ID: 11053108
    [Abstract] [Full Text] [Related]

  • 12. Posttranscriptional modifications at the 37th position in the anticodon stem-loop of tRNA: structural insights from MD simulations.
    Seelam Prabhakar P, Takyi NA, Wetmore SD.
    RNA; 2021 Feb 21; 27(2):202-220. PubMed ID: 33214333
    [Abstract] [Full Text] [Related]

  • 13. Metal ion stabilization of the U-turn of the A37 N6-dimethylallyl-modified anticodon stem-loop of Escherichia coli tRNAPhe.
    Cabello-Villegas J, Tworowska I, Nikonowicz EP.
    Biochemistry; 2004 Jan 13; 43(1):55-66. PubMed ID: 14705931
    [Abstract] [Full Text] [Related]

  • 14. The influence of hypermodified nucleosides lysidine and t(6)A to recognize the AUA codon instead of AUG: a molecular dynamics simulation study.
    Sonawane KD, Sambhare SB.
    Integr Biol (Camb); 2015 Nov 13; 7(11):1387-95. PubMed ID: 26215455
    [Abstract] [Full Text] [Related]

  • 15. Base pairing within the psi32,psi39-modified anticodon arm of Escherichia coli tRNA(Phe).
    Tworowska I, Nikonowicz EP.
    J Am Chem Soc; 2006 Dec 13; 128(49):15570-1. PubMed ID: 17147349
    [Abstract] [Full Text] [Related]

  • 16. tRNA prefers to kiss.
    Scarabino D, Crisari A, Lorenzini S, Williams K, Tocchini-Valentini GP.
    EMBO J; 1999 Aug 16; 18(16):4571-8. PubMed ID: 10449422
    [Abstract] [Full Text] [Related]

  • 17. Conformational preferences of modified nucleoside N(2)-methylguanosine (m(2)G) and its derivative N(2), N(2)-dimethylguanosine (m(2)(2)G) occur at 26th position (hinge region) in tRNA.
    Bavi RS, Kamble AD, Kumbhar NM, Kumbhar BV, Sonawane KD.
    Cell Biochem Biophys; 2011 Dec 16; 61(3):507-21. PubMed ID: 21735129
    [Abstract] [Full Text] [Related]

  • 18. Solution structure of psi32-modified anticodon stem-loop of Escherichia coli tRNAPhe.
    Cabello-Villegas J, Nikonowicz EP.
    Nucleic Acids Res; 2005 Dec 16; 33(22):6961-71. PubMed ID: 16377777
    [Abstract] [Full Text] [Related]

  • 19. Loop stereochemistry and dynamics in transfer RNA.
    Westhof E, Dumas P, Moras D.
    J Biomol Struct Dyn; 1983 Oct 16; 1(2):337-55. PubMed ID: 6401114
    [Abstract] [Full Text] [Related]

  • 20. Molecular dynamics simulations of solvated yeast tRNA(Asp).
    Auffinger P, Louise-May S, Westhof E.
    Biophys J; 1999 Jan 16; 76(1 Pt 1):50-64. PubMed ID: 9876122
    [Abstract] [Full Text] [Related]

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