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Journal Abstract Search

249 related items for PubMed ID: 23073221

  • 21. Analysis of sequence dependent variations in secondary and tertiary structure of tRNA molecules.
    Bhattacharyya D, Bansal M.
    J Biomol Struct Dyn; 1994 Jun; 11(6):1251-75. PubMed ID: 7946073
    [Abstract] [Full Text] [Related]

  • 22. Backbone-base interactions critical to quantum stabilization of transfer RNA anticodon structure.
    Witts RN, Hopson EC, Koballa DE, Van Boening TA, Hopkins NH, Patterson EV, Nagan MC.
    J Phys Chem B; 2013 Jun 27; 117(25):7489-97. PubMed ID: 23742318
    [Abstract] [Full Text] [Related]

  • 23. RNA hydration: three nanoseconds of multiple molecular dynamics simulations of the solvated tRNA(Asp) anticodon hairpin.
    Auffinger P, Westhof E.
    J Mol Biol; 1997 Jun 13; 269(3):326-41. PubMed ID: 9199403
    [Abstract] [Full Text] [Related]

  • 24. The effect of queuosine on tRNA structure and function.
    Morris RC, Brown KG, Elliott MS.
    J Biomol Struct Dyn; 1999 Feb 13; 16(4):757-74. PubMed ID: 10217448
    [Abstract] [Full Text] [Related]

  • 25. The effect of pseudouridine and pH on the structure and dynamics of the anticodon stem-loop of tRNA(Lys,3).
    Durant PC, Davis DR.
    Nucleic Acids Symp Ser; 1997 Feb 13; (36):56-7. PubMed ID: 9478205
    [Abstract] [Full Text] [Related]

  • 26. A magnesium-induced conformational transition in the loop of a DNA analog of the yeast tRNA(Phe) anticodon is dependent on RNA-like modifications of the bases of the stem.
    Guenther RH, Hardin CC, Sierzputowska-Gracz H, Dao V, Agris PF.
    Biochemistry; 1992 Nov 17; 31(45):11004-11. PubMed ID: 1445838
    [Abstract] [Full Text] [Related]

  • 27. The three conformations of the anticodon loop of yeast tRNA(Phe).
    Striker G, Labuda D, Vega-Martin MC.
    J Biomol Struct Dyn; 1989 Oct 17; 7(2):235-55. PubMed ID: 2690867
    [Abstract] [Full Text] [Related]

  • 28. H-bond stability in the tRNA(Asp) anticodon hairpin: 3 ns of multiple molecular dynamics simulations.
    Auffinger P, Westhof E.
    Biophys J; 1996 Aug 17; 71(2):940-54. PubMed ID: 8842234
    [Abstract] [Full Text] [Related]

  • 29. Structural effects of hypermodified nucleosides in the Escherichia coli and human tRNALys anticodon loop: the effect of nucleosides s2U, mcm5U, mcm5s2U, mnm5s2U, t6A, and ms2t6A.
    Durant PC, Bajji AC, Sundaram M, Kumar RK, Davis DR.
    Biochemistry; 2005 Jun 07; 44(22):8078-89. PubMed ID: 15924427
    [Abstract] [Full Text] [Related]

  • 30. 1-Methylguanosine in place of Y base at position 37 in phenylalanine tRNA is responsible for its shiftiness in retroviral ribosomal frameshifting.
    Carlson BA, Mushinski JF, Henderson DW, Kwon SY, Crain PF, Lee BJ, Hatfield DL.
    Virology; 2001 Jan 05; 279(1):130-5. PubMed ID: 11145896
    [Abstract] [Full Text] [Related]

  • 31. Ribosome binding of DNA analogs of tRNA requires base modifications and supports the "extended anticodon".
    Dao V, Guenther R, Malkiewicz A, Nawrot B, Sochacka E, Kraszewski A, Jankowska J, Everett K, Agris PF.
    Proc Natl Acad Sci U S A; 1994 Mar 15; 91(6):2125-9. PubMed ID: 7510886
    [Abstract] [Full Text] [Related]

  • 32. 5-Methylcytidine is required for cooperative binding of Mg2+ and a conformational transition at the anticodon stem-loop of yeast phenylalanine tRNA.
    Chen Y, Sierzputowska-Gracz H, Guenther R, Everett K, Agris PF.
    Biochemistry; 1993 Sep 28; 32(38):10249-53. PubMed ID: 8399153
    [Abstract] [Full Text] [Related]

  • 33. A distinctive RNA fold: the solution structure of an analogue of the yeast tRNAPhe T Psi C domain.
    Koshlap KM, Guenther R, Sochacka E, Malkiewicz A, Agris PF.
    Biochemistry; 1999 Jul 06; 38(27):8647-56. PubMed ID: 10393540
    [Abstract] [Full Text] [Related]

  • 34. Functional anticodon architecture of human tRNALys3 includes disruption of intraloop hydrogen bonding by the naturally occurring amino acid modification, t6A.
    Stuart JW, Gdaniec Z, Guenther R, Marszalek M, Sochacka E, Malkiewicz A, Agris PF.
    Biochemistry; 2000 Nov 07; 39(44):13396-404. PubMed ID: 11063577
    [Abstract] [Full Text] [Related]

  • 35. Wobble base-pairing in codon-anticodon interactions: a theoretical modelling study.
    Mangang SU, Lyngdoh RH.
    Indian J Biochem Biophys; 2001 Nov 07; 38(1-2):115-9. PubMed ID: 11563322
    [Abstract] [Full Text] [Related]

  • 36. Conservation in evolution for a small monomeric phenylalanyl-tRNA synthetase of the tRNA(Phe) recognition nucleotides and initial aminoacylation site.
    Aphasizhev R, Senger B, Rengers JU, Sprinzl M, Walter P, Nussbaum G, Fasiolo F.
    Biochemistry; 1996 Jan 09; 35(1):117-23. PubMed ID: 8555164
    [Abstract] [Full Text] [Related]

  • 37. Structural basis of anticodon loop recognition by glutaminyl-tRNA synthetase.
    Rould MA, Perona JJ, Steitz TA.
    Nature; 1991 Jul 18; 352(6332):213-8. PubMed ID: 1857417
    [Abstract] [Full Text] [Related]

  • 38. Molecular dynamics simulation and quantum mechanical calculations on α-D-N-acetylneuraminic acid.
    Priyadarzini TR, Subashini B, Selvin JF, Veluraja K.
    Carbohydr Res; 2012 Apr 01; 351():93-7. PubMed ID: 22356929
    [Abstract] [Full Text] [Related]

  • 39. Mechanism, specificity and general properties of the yeast enzyme catalysing the formation of inosine 34 in the anticodon of transfer RNA.
    Auxilien S, Crain PF, Trewyn RW, Grosjean H.
    J Mol Biol; 1996 Oct 04; 262(4):437-58. PubMed ID: 8893855
    [Abstract] [Full Text] [Related]

  • 40. Stabilization energies of the hydrogen-bonded and stacked structures of nucleic acid base pairs in the crystal geometries of CG, AT, and AC DNA steps and in the NMR geometry of the 5'-d(GCGAAGC)-3' hairpin: Complete basis set calculations at the MP2 and CCSD(T) levels.
    Dabkowska I, Gonzalez HV, Jurecka P, Hobza P.
    J Phys Chem A; 2005 Feb 17; 109(6):1131-6. PubMed ID: 16833422
    [Abstract] [Full Text] [Related]

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