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Journal Abstract Search

515 related items for PubMed ID: 23142247

  • 1. Boolean modeling of biological regulatory networks: a methodology tutorial.
    Saadatpour A, Albert R.
    Methods; 2013 Jul 15; 62(1):3-12. PubMed ID: 23142247
    [Abstract] [Full Text] [Related]

  • 2. Modeling and analyzing complex biological networks incooperating experimental information on both network topology and stable states.
    Zou YM.
    Bioinformatics; 2010 Aug 15; 26(16):2037-41. PubMed ID: 20601441
    [Abstract] [Full Text] [Related]

  • 3. A computational algebra approach to the reverse engineering of gene regulatory networks.
    Laubenbacher R, Stigler B.
    J Theor Biol; 2004 Aug 21; 229(4):523-37. PubMed ID: 15246788
    [Abstract] [Full Text] [Related]

  • 4. Dynamic network rewiring determines temporal regulatory functions in Drosophila melanogaster development processes.
    Kim MS, Kim JR, Cho KH.
    Bioessays; 2010 Jun 21; 32(6):505-13. PubMed ID: 20486137
    [Abstract] [Full Text] [Related]

  • 5. Quantitative model analysis with diverse biological data: applications in developmental pattern formation.
    Pargett M, Umulis DM.
    Methods; 2013 Jul 15; 62(1):56-67. PubMed ID: 23557990
    [Abstract] [Full Text] [Related]

  • 6. A software tool to model genetic regulatory networks. Applications to the modeling of threshold phenomena and of spatial patterning in Drosophila.
    Dilão R, Muraro D.
    PLoS One; 2010 May 27; 5(5):e10743. PubMed ID: 20523731
    [Abstract] [Full Text] [Related]

  • 7. Evolution of early development in dipterans: reverse-engineering the gap gene network in the moth midge Clogmia albipunctata (Psychodidae).
    Crombach A, García-Solache MA, Jaeger J.
    Biosystems; 2014 Sep 27; 123():74-85. PubMed ID: 24911671
    [Abstract] [Full Text] [Related]

  • 8. Inferring gene regulatory networks from time series data using the minimum description length principle.
    Zhao W, Serpedin E, Dougherty ER.
    Bioinformatics; 2006 Sep 01; 22(17):2129-35. PubMed ID: 16845143
    [Abstract] [Full Text] [Related]

  • 9. A review on the computational approaches for gene regulatory network construction.
    Chai LE, Loh SK, Low ST, Mohamad MS, Deris S, Zakaria Z.
    Comput Biol Med; 2014 May 01; 48():55-65. PubMed ID: 24637147
    [Abstract] [Full Text] [Related]

  • 10. Methods of robustness analysis for Boolean models of gene control networks.
    Chaves M, Sontag ED, Albert R.
    Syst Biol (Stevenage); 2006 Jul 01; 153(4):154-67. PubMed ID: 16986617
    [Abstract] [Full Text] [Related]

  • 11. Using evolutionary computations to understand the design and evolution of gene and cell regulatory networks.
    Spirov A, Holloway D.
    Methods; 2013 Jul 15; 62(1):39-55. PubMed ID: 23726941
    [Abstract] [Full Text] [Related]

  • 12. Modular genetic regulatory networks increase organization during pattern formation.
    Mohamadlou H, Podgorski GJ, Flann NS.
    Biosystems; 2016 Aug 15; 146():77-84. PubMed ID: 27327866
    [Abstract] [Full Text] [Related]

  • 13. Efficient reverse-engineering of a developmental gene regulatory network.
    Crombach A, Wotton KR, Cicin-Sain D, Ashyraliyev M, Jaeger J.
    PLoS Comput Biol; 2012 Aug 15; 8(7):e1002589. PubMed ID: 22807664
    [Abstract] [Full Text] [Related]

  • 14. Identifying dynamical modules from genetic regulatory systems: applications to the segment polarity network.
    Irons DJ, Monk NA.
    BMC Bioinformatics; 2007 Oct 25; 8():413. PubMed ID: 17961242
    [Abstract] [Full Text] [Related]

  • 15. The gap gene network.
    Jaeger J.
    Cell Mol Life Sci; 2011 Jan 25; 68(2):243-74. PubMed ID: 20927566
    [Abstract] [Full Text] [Related]

  • 16. Gap Gene Regulatory Dynamics Evolve along a Genotype Network.
    Crombach A, Wotton KR, Jiménez-Guri E, Jaeger J.
    Mol Biol Evol; 2016 May 25; 33(5):1293-307. PubMed ID: 26796549
    [Abstract] [Full Text] [Related]

  • 17. Genetic network identification using convex programming.
    Julius A, Zavlanos M, Boyd S, Pappas GJ.
    IET Syst Biol; 2009 May 25; 3(3):155-66. PubMed ID: 19449976
    [Abstract] [Full Text] [Related]

  • 18. Robustness and state-space structure of Boolean gene regulatory models.
    Willadsen K, Wiles J.
    J Theor Biol; 2007 Dec 21; 249(4):749-65. PubMed ID: 17936309
    [Abstract] [Full Text] [Related]

  • 19. Enhancing gene regulatory network inference through data integration with markov random fields.
    Banf M, Rhee SY.
    Sci Rep; 2017 Feb 01; 7():41174. PubMed ID: 28145456
    [Abstract] [Full Text] [Related]

  • 20. The impact of function perturbations in Boolean networks.
    Xiao Y, Dougherty ER.
    Bioinformatics; 2007 May 15; 23(10):1265-73. PubMed ID: 17379691
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