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Journal Abstract Search

563 related items for PubMed ID: 23192538

  • 1. Global alignment of protein-protein interaction networks.
    Mongiovì M, Sharan R.
    Methods Mol Biol; 2013; 939():21-34. PubMed ID: 23192538
    [Abstract] [Full Text] [Related]

  • 2. C-GRAAL: common-neighbors-based global GRAph ALignment of biological networks.
    Memišević V, Pržulj N.
    Integr Biol (Camb); 2012 Jul; 4(7):734-43. PubMed ID: 22234340
    [Abstract] [Full Text] [Related]

  • 3. Computational reconstruction of protein-protein interaction networks: algorithms and issues.
    Franzosa E, Linghu B, Xia Y.
    Methods Mol Biol; 2009 Jul; 541():89-100. PubMed ID: 19381528
    [Abstract] [Full Text] [Related]

  • 4. Global alignment of multiple protein interaction networks.
    Singh R, Xu J, Berger B.
    Pac Symp Biocomput; 2008 Jul; ():303-14. PubMed ID: 18229695
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  • 5. Pairwise alignment of protein interaction networks.
    Koyutürk M, Kim Y, Topkara U, Subramaniam S, Szpankowski W, Grama A.
    J Comput Biol; 2006 Mar; 13(2):182-99. PubMed ID: 16597234
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  • 6. ConnectedAlign: a PPI network alignment method for identifying conserved protein complexes across multiple species.
    Gao J, Song B, Hu X, Yan F, Wang J.
    BMC Bioinformatics; 2018 Aug 13; 19(Suppl 9):286. PubMed ID: 30367584
    [Abstract] [Full Text] [Related]

  • 7. GreedyPlus: An Algorithm for the Alignment of Interface Interaction Networks.
    Law B, Bader GD.
    Sci Rep; 2015 Jul 13; 5():12074. PubMed ID: 26165520
    [Abstract] [Full Text] [Related]

  • 8. Global Biological Network Alignment by Using Efficient Memetic Algorithm.
    Maoguo Gong, Zhenglin Peng, Lijia Ma, Jiaxiang Huang.
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Nov 13; 13(6):1117-1129. PubMed ID: 28055895
    [Abstract] [Full Text] [Related]

  • 9. Protein interaction networks of Saccharomyces cerevisiae, Caenorhabditis elegans and Drosophila melanogaster: large-scale organization and robustness.
    Li D, Li J, Ouyang S, Wang J, Wu S, Wan P, Zhu Y, Xu X, He F.
    Proteomics; 2006 Jan 13; 6(2):456-61. PubMed ID: 16317777
    [Abstract] [Full Text] [Related]

  • 10. PrimAlign: PageRank-inspired Markovian alignment for large biological networks.
    Kalecky K, Cho YR.
    Bioinformatics; 2018 Jul 01; 34(13):i537-i546. PubMed ID: 29949962
    [Abstract] [Full Text] [Related]

  • 11. Global alignment of multiple protein interaction networks with application to functional orthology detection.
    Singh R, Xu J, Berger B.
    Proc Natl Acad Sci U S A; 2008 Sep 02; 105(35):12763-8. PubMed ID: 18725631
    [Abstract] [Full Text] [Related]

  • 12. Identifying protein complexes in protein-protein interaction networks by using clique seeds and graph entropy.
    Chen B, Shi J, Zhang S, Wu FX.
    Proteomics; 2013 Jan 02; 13(2):269-77. PubMed ID: 23112006
    [Abstract] [Full Text] [Related]

  • 13. Detecting protein complexes in a PPI network: a gene ontology based multi-objective evolutionary approach.
    Mukhopadhyay A, Ray S, De M.
    Mol Biosyst; 2012 Nov 02; 8(11):3036-48. PubMed ID: 22990765
    [Abstract] [Full Text] [Related]

  • 14. Pairwise alignment of interaction networks by fast identification of maximal conserved patterns.
    Tian W, Samatova NF.
    Pac Symp Biocomput; 2009 Nov 02; ():99-110. PubMed ID: 19209698
    [Abstract] [Full Text] [Related]

  • 15. Protein complex prediction with RNSC.
    King AD, Pržulj N, Jurisica I.
    Methods Mol Biol; 2012 Nov 02; 804():297-312. PubMed ID: 22144160
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  • 16. Protein-protein interaction network-based detection of functionally similar proteins within species.
    Song B, Wang F, Guo Y, Sang Q, Liu M, Li D, Fang W, Zhang D.
    Proteins; 2012 Jul 02; 80(7):1736-43. PubMed ID: 22411607
    [Abstract] [Full Text] [Related]

  • 17. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
    Alkan F, Erten C.
    Bioinformatics; 2015 Jul 15; 31(14):2356-63. PubMed ID: 25788620
    [Abstract] [Full Text] [Related]

  • 18. AVID: an integrative framework for discovering functional relationships among proteins.
    Jiang T, Keating AE.
    BMC Bioinformatics; 2005 Jun 01; 6():136. PubMed ID: 15929793
    [Abstract] [Full Text] [Related]

  • 19. Functional centrality: detecting lethality of proteins in protein interaction networks.
    Tew KL, Li XL, Tan SH.
    Genome Inform; 2007 Jun 01; 19():166-77. PubMed ID: 18546514
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  • 20. BalanceAli: Multiple PPI Network Alignment With Balanced High Coverage and Consistency.
    Gao J, Song B, Ke W, Hu X.
    IEEE Trans Nanobioscience; 2017 Jul 01; 16(5):333-340. PubMed ID: 28541215
    [Abstract] [Full Text] [Related]

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