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Journal Abstract Search

181 related items for PubMed ID: 2321961

  • 1. Prominent stacking interaction with aromatic amino acid by N-quarternization of nucleic acid base: X-ray crystallographic characteristics and biological implications.
    Ishida T, Ueda H, Segawa K, Doi M, Inoue M.
    Arch Biochem Biophys; 1990 Apr; 278(1):217-27. PubMed ID: 2321961
    [Abstract] [Full Text] [Related]

  • 2. Stacking interactions between protonated nucleic acid bases and aromatic amino acids: spectroscopic and structural analyses of m3CMP-tryptophan derivative complex.
    Ueda H, Segawa K, Doi M, Inoue M, Ishida T.
    Nucleic Acids Symp Ser; 1989 Apr; (21):59-60. PubMed ID: 2608478
    [Abstract] [Full Text] [Related]

  • 3. A selective recognition mode of a nucleic acid base by an aromatic amino acid: L-phenylalanine-7-methylguanosine 5'-monophosphate stacking interaction.
    Ishida T, Doi M, Inoue M.
    Nucleic Acids Res; 1988 Jul 11; 16(13):6175-90. PubMed ID: 3399389
    [Abstract] [Full Text] [Related]

  • 4. Cooperative face-to-face and edge-to-face aromatic interactions of tryptophan indole ring with N7-quarternized guanine and neutral cytosine bases.
    Ishida T, Tarui M, In Y, Ogiyama M, Doi M, Inoue M.
    FEBS Lett; 1993 Nov 01; 333(3):214-6. PubMed ID: 8224181
    [Abstract] [Full Text] [Related]

  • 5. X-ray structure of cytidine-5'-O-dimethylphosphate. Novel stacking between the ribosyl O(2') hydroxyl oxygen atom and the base.
    Brennan RG, Kondo NS, Sundaralingam M.
    Nucleic Acids Res; 1984 Sep 11; 12(17):6813-25. PubMed ID: 6548306
    [Abstract] [Full Text] [Related]

  • 6. Zwitterionic character of nucleotides: possible significance in the evolution of nucleic acids.
    Sundaralingam M, Prusiner P.
    Nucleic Acids Res; 1978 Nov 11; 5(11):4375-83. PubMed ID: 724518
    [Abstract] [Full Text] [Related]

  • 7. Mutual assistance of hydrogen-bond pairing and aromatic stacking interactions for molecular recognition: spectroscopic study on the interaction of guanine base with cytosine and tryptophan molecules.
    Tarui M, Furumura H, Kafuku Y, Ishida T, Inoue M.
    Biochem Biophys Res Commun; 1992 Mar 16; 183(2):577-83. PubMed ID: 1550566
    [Abstract] [Full Text] [Related]

  • 8. Crystallographic studies of drug-nucleic acid interactions: proflavine intercalation between the non-complementary base-pairs of cytidilyl-3',5'-adenosine.
    Westhof E, Rao ST, Sundaralingam M.
    J Mol Biol; 1980 Sep 25; 142(3):331-61. PubMed ID: 7463478
    [No Abstract] [Full Text] [Related]

  • 9. Inter- and intramolecular stacking interaction between indole and adeninium rings.
    Ishida T, Shibata M, Fujii K, Inoue M.
    Biochemistry; 1983 Jul 19; 22(15):3571-81. PubMed ID: 6615785
    [Abstract] [Full Text] [Related]

  • 10. Stabilization energies of the hydrogen-bonded and stacked structures of nucleic acid base pairs in the crystal geometries of CG, AT, and AC DNA steps and in the NMR geometry of the 5'-d(GCGAAGC)-3' hairpin: Complete basis set calculations at the MP2 and CCSD(T) levels.
    Dabkowska I, Gonzalez HV, Jurecka P, Hobza P.
    J Phys Chem A; 2005 Feb 17; 109(6):1131-6. PubMed ID: 16833422
    [Abstract] [Full Text] [Related]

  • 11. On the interaction between flavin-adenine rings and between flavin-indole rings by X-ray structural studies.
    Inoue M, Okuda Y, Ishida T, Nakagaki M.
    Arch Biochem Biophys; 1983 Nov 17; 227(1):52-70. PubMed ID: 6639083
    [Abstract] [Full Text] [Related]

  • 12. Structural effects of the C2-methylhypoxanthine:cytosine base pair in B-DNA: A combined NMR and X-ray diffraction study of d(CGC[m2I]AATTCGCG).
    Yang D, Gao Y, Robinson H, van der Marel GA, van Boom JH, Wang AH.
    Biochemistry; 1993 Aug 24; 32(33):8672-81. PubMed ID: 8357809
    [Abstract] [Full Text] [Related]

  • 13. Inter-strand C-H...O hydrogen bonds stabilizing four-stranded intercalated molecules: stereoelectronic effects of O4' in cytosine-rich DNA.
    Berger I, Egli M, Rich A.
    Proc Natl Acad Sci U S A; 1996 Oct 29; 93(22):12116-21. PubMed ID: 8901542
    [Abstract] [Full Text] [Related]

  • 14. Structure and thermodynamics of nonalternating C.G base pairs in Z-DNA: the 1.3-A crystal structure of the asymmetric hexanucleotide d(m5CGGGm5CG).d(m5CGCCm5CG).
    Schroth GP, Kagawa TF, Ho PS.
    Biochemistry; 1993 Dec 14; 32(49):13381-92. PubMed ID: 8257675
    [Abstract] [Full Text] [Related]

  • 15. Interactions of nucleic-acid base-pairs with acidic side chains of protein. Crystal structures of adenine: 1-(2-carboxyethyl)uracil (1:1) complex and 1-methylcytosine: 9-(2-carboxyethyl)guanine (1:1) complex.
    Takenaka A, Fujita S, Sasada Y.
    Nucleic Acids Symp Ser; 1982 Dec 14; (11):281-4. PubMed ID: 7183967
    [No Abstract] [Full Text] [Related]

  • 16. Stacking and hydrogen bonding interactions between phenylalanine and guanine nucleotide: crystal structure of L-phenylalanine-7-methylguanosine-5'-monophosphate complex.
    Ishida T, Kamiichi K, Kuwahara A, Doi M, Inoue M.
    Biochem Biophys Res Commun; 1986 Apr 14; 136(1):294-9. PubMed ID: 3707577
    [Abstract] [Full Text] [Related]

  • 17. X-ray crystallographic analysis of a ternary intercalation complex between proflavine and the dinucleoside monophosphates CpA and UpG.
    Aggarwal A, Islam SA, Kuroda R, Neidle S.
    Biopolymers; 1984 Jun 14; 23(6):1025-41. PubMed ID: 6733246
    [No Abstract] [Full Text] [Related]

  • 18. Atomic resolution analysis of a 2:1 complex of CpG and acridine orange.
    Wang AH, Quigley GJ, Rich A.
    Nucleic Acids Res; 1979 Aug 24; 6(12):3879-90. PubMed ID: 493128
    [Abstract] [Full Text] [Related]

  • 19. Model for interactions of amino acid side chains with Watson-Crick base pair of guanine and cytosine: crystal structure of 9-(2-carbamoylethyl)guanine and 1-methylcytosine complex.
    Fujita S, Takenaka A, Sasada Y.
    Biochemistry; 1985 Jan 15; 24(2):508-12. PubMed ID: 4038884
    [Abstract] [Full Text] [Related]

  • 20. Refinement of DNA structures through near-edge X-ray absorption fine structure analysis: applications on guanine and cytosine nucleobases, nucleosides, and nucleotides.
    Hua W, Gao B, Li S, Agren H, Luo Y.
    J Phys Chem B; 2010 Oct 21; 114(41):13214-22. PubMed ID: 20873844
    [Abstract] [Full Text] [Related]

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