These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
22. SNFM: A semi-supervised NMF algorithm for detecting biological functional modules. Man YT, Liu GM, Yang K, Zhou XZ. Math Biosci Eng; 2019 Mar 07; 16(4):1933-1948. PubMed ID: 31137193 [Abstract] [Full Text] [Related]
24. Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data. Li M, Wu X, Wang J, Pan Y. BMC Bioinformatics; 2012 May 23; 13():109. PubMed ID: 22621308 [Abstract] [Full Text] [Related]
25. A computational interactome and functional annotation for the human proteome. Garzón JI, Deng L, Murray D, Shapira S, Petrey D, Honig B. Elife; 2016 Oct 22; 5():. PubMed ID: 27770567 [Abstract] [Full Text] [Related]
26. Prediction of problematic complexes from PPI networks: sparse, embedded, and small complexes. Yong CH, Wong L. Biol Direct; 2015 Aug 01; 10():40. PubMed ID: 26231465 [Abstract] [Full Text] [Related]
27. Integration of protein sequence and protein-protein interaction data by hypergraph learning to identify novel protein complexes. Xia S, Li D, Deng X, Liu Z, Zhu H, Liu Y, Li D. Brief Bioinform; 2024 May 23; 25(4):. PubMed ID: 38851299 [Abstract] [Full Text] [Related]
28. Determining the minimum number of protein-protein interactions required to support known protein complexes. Nakajima N, Hayashida M, Jansson J, Maruyama O, Akutsu T. PLoS One; 2018 May 23; 13(4):e0195545. PubMed ID: 29698482 [Abstract] [Full Text] [Related]
29. Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering. Theofilatos K, Pavlopoulou N, Papasavvas C, Likothanassis S, Dimitrakopoulos C, Georgopoulos E, Moschopoulos C, Mavroudi S. Artif Intell Med; 2015 Mar 23; 63(3):181-9. PubMed ID: 25765008 [Abstract] [Full Text] [Related]
30. TACT: Transcriptome Auto-annotation Conducting Tool of H-InvDB. Yamasaki C, Kawashima H, Todokoro F, Imamizu Y, Ogawa M, Tanino M, Itoh T, Gojobori T, Imanishi T. Nucleic Acids Res; 2006 Jul 01; 34(Web Server issue):W345-9. PubMed ID: 16845023 [Abstract] [Full Text] [Related]
31. Analyses of Protein Interaction Networks Using Computational Tools. Dong S, Provart NJ. Methods Mol Biol; 2018 Jul 01; 1794():97-117. PubMed ID: 29855953 [Abstract] [Full Text] [Related]