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Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

841 related items for PubMed ID: 23368786

  • 21. DyNetViewer: a Cytoscape app for dynamic network construction, analysis and visualization.
    Li M, Yang J, Wu FX, Pan Y, Wang J.
    Bioinformatics; 2018 May 01; 34(9):1597-1599. PubMed ID: 29293938
    [Abstract] [Full Text] [Related]

  • 22. Automated Extraction and Visualization of Protein-Protein Interaction Networks and Beyond: A Text-Mining Protocol.
    Raja K, Natarajan J, Kuusisto F, Steill J, Ross I, Thomson J, Stewart R.
    Methods Mol Biol; 2020 May 01; 2074():13-34. PubMed ID: 31583627
    [Abstract] [Full Text] [Related]

  • 23. CytoCluster: A Cytoscape Plugin for Cluster Analysis and Visualization of Biological Networks.
    Li M, Li D, Tang Y, Wu F, Wang J.
    Int J Mol Sci; 2017 Aug 31; 18(9):. PubMed ID: 28858211
    [Abstract] [Full Text] [Related]

  • 24. CytoKavosh: a cytoscape plug-in for finding network motifs in large biological networks.
    Masoudi-Nejad A, Ansariola M, Kashani ZR, Salehzadeh-Yazdi A, Khakabimamaghani S.
    PLoS One; 2012 Aug 31; 7(8):e43287. PubMed ID: 22952659
    [Abstract] [Full Text] [Related]

  • 25. BiNoM 2.0, a Cytoscape plugin for accessing and analyzing pathways using standard systems biology formats.
    Bonnet E, Calzone L, Rovera D, Stoll G, Barillot E, Zinovyev A.
    BMC Syst Biol; 2013 Mar 01; 7():18. PubMed ID: 23453054
    [Abstract] [Full Text] [Related]

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  • 29. iRefScape. A Cytoscape plug-in for visualization and data mining of protein interaction data from iRefIndex.
    Razick S, Mora A, Michalickova K, Boddie P, Donaldson IM.
    BMC Bioinformatics; 2011 Oct 05; 12():388. PubMed ID: 21975162
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  • 30. Graphle: Interactive exploration of large, dense graphs.
    Huttenhower C, Mehmood SO, Troyanskaya OG.
    BMC Bioinformatics; 2009 Dec 14; 10():417. PubMed ID: 20003429
    [Abstract] [Full Text] [Related]

  • 31. A graph-based approach for designing extensible pipelines.
    Rodrigues MR, Magalhães WC, Machado M, Tarazona-Santos E.
    BMC Bioinformatics; 2012 Jul 12; 13():163. PubMed ID: 22788675
    [Abstract] [Full Text] [Related]

  • 32. ReNE: a cytoscape plugin for regulatory network enhancement.
    Politano G, Benso A, Savino A, Di Carlo S.
    PLoS One; 2014 Jul 12; 9(12):e115585. PubMed ID: 25541727
    [Abstract] [Full Text] [Related]

  • 33. Accurately Detecting Protein Complexes by Graph Embedding and Combining Functions with Interactions.
    Yao H, Shi Y, Guan J, Zhou S.
    IEEE/ACM Trans Comput Biol Bioinform; 2020 Jul 12; 17(3):777-787. PubMed ID: 30736004
    [Abstract] [Full Text] [Related]

  • 34. The EntOptLayout Cytoscape plug-in for the efficient visualization of major protein complexes in protein-protein interaction and signalling networks.
    Ágg B, Császár A, Szalay-Bekő M, Veres DV, Mizsei R, Ferdinandy P, Csermely P, Kovács IA.
    Bioinformatics; 2019 Nov 01; 35(21):4490-4492. PubMed ID: 31004478
    [Abstract] [Full Text] [Related]

  • 35. 3DScapeCS: application of three dimensional, parallel, dynamic network visualization in Cytoscape.
    Wang Q, Tang B, Song L, Ren B, Liang Q, Xie F, Zhuo Y, Liu X, Zhang L.
    BMC Bioinformatics; 2013 Nov 14; 14():322. PubMed ID: 24225050
    [Abstract] [Full Text] [Related]

  • 36. Clust&See: a Cytoscape plugin for the identification, visualization and manipulation of network clusters.
    Spinelli L, Gambette P, Chapple CE, Robisson B, Baudot A, Garreta H, Tichit L, Guénoche A, Brun C.
    Biosystems; 2013 Aug 14; 113(2):91-5. PubMed ID: 23743336
    [Abstract] [Full Text] [Related]

  • 37. Linking Cytoscape and the corynebacterial reference database CoryneRegNet.
    Baumbach J, Apeltsin L.
    BMC Genomics; 2008 Apr 21; 9():184. PubMed ID: 18426593
    [Abstract] [Full Text] [Related]

  • 38. L-GRAAL: Lagrangian graphlet-based network aligner.
    Malod-Dognin N, Pržulj N.
    Bioinformatics; 2015 Jul 01; 31(13):2182-9. PubMed ID: 25725498
    [Abstract] [Full Text] [Related]

  • 39. Closing the gap between formats for storing layout information in systems biology.
    Hoksza D, Gawron P, Ostaszewski M, Hasenauer J, Schneider R.
    Brief Bioinform; 2020 Jul 15; 21(4):1249-1260. PubMed ID: 31273380
    [Abstract] [Full Text] [Related]

  • 40. Discerning molecular interactions: A comprehensive review on biomolecular interaction databases and network analysis tools.
    Miryala SK, Anbarasu A, Ramaiah S.
    Gene; 2018 Feb 05; 642():84-94. PubMed ID: 29129810
    [Abstract] [Full Text] [Related]

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