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157 related items for PubMed ID: 23433242

  • 1. Orthology Guided Assembly in highly heterozygous crops: creating a reference transcriptome to uncover genetic diversity in Lolium perenne.
    Ruttink T, Sterck L, Rohde A, Bendixen C, Rouzé P, Asp T, Van de Peer Y, Roldan-Ruiz I.
    Plant Biotechnol J; 2013 Jun; 11(5):605-17. PubMed ID: 23433242
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  • 5. Comparative performance of transcriptome assembly methods for non-model organisms.
    Huang X, Chen XG, Armbruster PA.
    BMC Genomics; 2016 Jul 27; 17():523. PubMed ID: 27464550
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  • 6. Large-scale transcriptome characterization and mass discovery of SNPs in globe artichoke and its related taxa.
    Scaglione D, Lanteri S, Acquadro A, Lai Z, Knapp SJ, Rieseberg L, Portis E.
    Plant Biotechnol J; 2012 Oct 27; 10(8):956-69. PubMed ID: 22849342
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  • 7. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.
    Liu S, Zhang Y, Zhou Z, Waldbieser G, Sun F, Lu J, Zhang J, Jiang Y, Zhang H, Wang X, Rajendran KV, Khoo L, Kucuktas H, Peatman E, Liu Z.
    BMC Genomics; 2012 Nov 05; 13():595. PubMed ID: 23127152
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  • 8. De novo transcriptome assembly and polymorphism detection in the flowering plant Silene vulgaris (Caryophyllaceae).
    Sloan DB, Keller SR, Berardi AE, Sanderson BJ, Karpovich JF, Taylor DR.
    Mol Ecol Resour; 2012 Mar 05; 12(2):333-43. PubMed ID: 21999839
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  • 12. Reference transcriptome assembly and annotation for perennial ryegrass.
    Shinozuka H, Cogan NOI, Spangenberg GC, Forster JW.
    Genome; 2017 Dec 05; 60(12):1086-1088. PubMed ID: 28841400
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  • 16. Comparative transcriptome analysis within the Lolium/Festuca species complex reveals high sequence conservation.
    Czaban A, Sharma S, Byrne SL, Spannagl M, Mayer KF, Asp T.
    BMC Genomics; 2015 Mar 28; 16(1):249. PubMed ID: 25886302
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  • 20. Challenges and strategies in transcriptome assembly and differential gene expression quantification. A comprehensive in silico assessment of RNA-seq experiments.
    Vijay N, Poelstra JW, Künstner A, Wolf JB.
    Mol Ecol; 2013 Feb 28; 22(3):620-34. PubMed ID: 22998089
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