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Journal Abstract Search

237 related items for PubMed ID: 23527883

  • 21. Fluctuation dynamics analysis of gp120 envelope protein reveals a topologically based communication network.
    Shrivastava I, LaLonde JM.
    Proteins; 2010 Nov 01; 78(14):2935-49. PubMed ID: 20718047
    [Abstract] [Full Text] [Related]

  • 22. Unliganded HIV-1 gp120 core structures assume the CD4-bound conformation with regulation by quaternary interactions and variable loops.
    Kwon YD, Finzi A, Wu X, Dogo-Isonagie C, Lee LK, Moore LR, Schmidt SD, Stuckey J, Yang Y, Zhou T, Zhu J, Vicic DA, Debnath AK, Shapiro L, Bewley CA, Mascola JR, Sodroski JG, Kwong PD.
    Proc Natl Acad Sci U S A; 2012 Apr 10; 109(15):5663-8. PubMed ID: 22451932
    [Abstract] [Full Text] [Related]

  • 23. Protein promiscuity: drug resistance and native functions--HIV-1 case.
    Fernández A, Tawfik DS, Berkhout B, Sanders R, Kloczkowski A, Sen T, Jernigan B.
    J Biomol Struct Dyn; 2005 Jun 10; 22(6):615-24. PubMed ID: 15842167
    [Abstract] [Full Text] [Related]

  • 24. Understanding of the bridging sheet formation of HIV-1 glycoprotein gp120.
    Da LT, Quan JM, Wu YD.
    J Phys Chem B; 2009 Oct 29; 113(43):14536-43. PubMed ID: 19813706
    [Abstract] [Full Text] [Related]

  • 25. Characterization of the conformational state and flexibility of HIV-1 glycoprotein gp120 core domain.
    Pan Y, Ma B, Keskin O, Nussinov R.
    J Biol Chem; 2004 Jul 16; 279(29):30523-30. PubMed ID: 15131118
    [Abstract] [Full Text] [Related]

  • 26. Molecular mechanism of HIV-1 gp120 mutations that reduce CD4 binding affinity.
    Kassler K, Sticht H.
    J Biomol Struct Dyn; 2014 Jul 16; 32(1):52-64. PubMed ID: 23297802
    [Abstract] [Full Text] [Related]

  • 27. A Highly Conserved gp120 Inner Domain Residue Modulates Env Conformation and Trimer Stability.
    Ding S, Tolbert WD, Prévost J, Pacheco B, Coutu M, Debbeche O, Xiang SH, Pazgier M, Finzi A.
    J Virol; 2016 Oct 01; 90(19):8395-409. PubMed ID: 27384653
    [Abstract] [Full Text] [Related]

  • 28. The highly conserved layer-3 component of the HIV-1 gp120 inner domain is critical for CD4-required conformational transitions.
    Désormeaux A, Coutu M, Medjahed H, Pacheco B, Herschhorn A, Gu C, Xiang SH, Mao Y, Sodroski J, Finzi A.
    J Virol; 2013 Mar 01; 87(5):2549-62. PubMed ID: 23255784
    [Abstract] [Full Text] [Related]

  • 29. Dynamic domains and geometrical properties of HIV-1 gp120 during conformational changes induced by CD4 binding.
    Liu SQ, Liu SX, Fu YX.
    J Mol Model; 2007 Mar 01; 13(3):411-24. PubMed ID: 17131136
    [Abstract] [Full Text] [Related]

  • 30. Naturally occurring variability in the envelope glycoprotein of HIV-1 and development of cell entry inhibitors.
    Brower ET, Schön A, Freire E.
    Biochemistry; 2010 Mar 23; 49(11):2359-67. PubMed ID: 20166763
    [Abstract] [Full Text] [Related]

  • 31. HIV-1 gp41 Residues Modulate CD4-Induced Conformational Changes in the Envelope Glycoprotein and Evolution of a Relaxed Conformation of gp120.
    Keller PW, Morrison O, Vassell R, Weiss CD.
    J Virol; 2018 Aug 15; 92(16):. PubMed ID: 29875245
    [Abstract] [Full Text] [Related]

  • 32. Topological layers in the HIV-1 gp120 inner domain regulate gp41 interaction and CD4-triggered conformational transitions.
    Finzi A, Xiang SH, Pacheco B, Wang L, Haight J, Kassa A, Danek B, Pancera M, Kwong PD, Sodroski J.
    Mol Cell; 2010 Mar 12; 37(5):656-67. PubMed ID: 20227370
    [Abstract] [Full Text] [Related]

  • 33. Mutagenic stabilization and/or disruption of a CD4-bound state reveals distinct conformations of the human immunodeficiency virus type 1 gp120 envelope glycoprotein.
    Xiang SH, Kwong PD, Gupta R, Rizzuto CD, Casper DJ, Wyatt R, Wang L, Hendrickson WA, Doyle ML, Sodroski J.
    J Virol; 2002 Oct 12; 76(19):9888-99. PubMed ID: 12208966
    [Abstract] [Full Text] [Related]

  • 34. Cryo-EM structure of a CD4-bound open HIV-1 envelope trimer reveals structural rearrangements of the gp120 V1V2 loop.
    Wang H, Cohen AA, Galimidi RP, Gristick HB, Jensen GJ, Bjorkman PJ.
    Proc Natl Acad Sci U S A; 2016 Nov 15; 113(46):E7151-E7158. PubMed ID: 27799557
    [Abstract] [Full Text] [Related]

  • 35. Characterization of human immunodeficiency virus type 1 monomeric and trimeric gp120 glycoproteins stabilized in the CD4-bound state: antigenicity, biophysics, and immunogenicity.
    Dey B, Pancera M, Svehla K, Shu Y, Xiang SH, Vainshtein J, Li Y, Sodroski J, Kwong PD, Mascola JR, Wyatt R.
    J Virol; 2007 Jun 15; 81(11):5579-93. PubMed ID: 17360741
    [Abstract] [Full Text] [Related]

  • 36. Residues in the gp41 Ectodomain Regulate HIV-1 Envelope Glycoprotein Conformational Transitions Induced by gp120-Directed Inhibitors.
    Pacheco B, Alsahafi N, Debbeche O, Prévost J, Ding S, Chapleau JP, Herschhorn A, Madani N, Princiotto A, Melillo B, Gu C, Zeng X, Mao Y, Smith AB, Sodroski J, Finzi A.
    J Virol; 2017 Mar 01; 91(5):. PubMed ID: 28003492
    [Abstract] [Full Text] [Related]

  • 37. Homology models of the HIV-1 attachment inhibitor BMS-626529 bound to gp120 suggest a unique mechanism of action.
    Langley DR, Kimura SR, Sivaprakasam P, Zhou N, Dicker I, McAuliffe B, Wang T, Kadow JF, Meanwell NA, Krystal M.
    Proteins; 2015 Feb 01; 83(2):331-50. PubMed ID: 25401969
    [Abstract] [Full Text] [Related]

  • 38. Structure of HIV-1 gp120 with gp41-interactive region reveals layered envelope architecture and basis of conformational mobility.
    Pancera M, Majeed S, Ban YE, Chen L, Huang CC, Kong L, Kwon YD, Stuckey J, Zhou T, Robinson JE, Schief WR, Sodroski J, Wyatt R, Kwong PD.
    Proc Natl Acad Sci U S A; 2010 Jan 19; 107(3):1166-71. PubMed ID: 20080564
    [Abstract] [Full Text] [Related]

  • 39. Thermodynamics of binding of a low-molecular-weight CD4 mimetic to HIV-1 gp120.
    Schön A, Madani N, Klein JC, Hubicki A, Ng D, Yang X, Smith AB, Sodroski J, Freire E.
    Biochemistry; 2006 Sep 12; 45(36):10973-80. PubMed ID: 16953583
    [Abstract] [Full Text] [Related]

  • 40. Comparative thermal unfolding study of psychrophilic and mesophilic subtilisin-like serine proteases by molecular dynamics simulations.
    Du X, Sang P, Xia YL, Li Y, Liang J, Ai SM, Ji XL, Fu YX, Liu SQ.
    J Biomol Struct Dyn; 2017 May 12; 35(7):1500-1517. PubMed ID: 27485684
    [Abstract] [Full Text] [Related]

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