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Journal Abstract Search

298 related items for PubMed ID: 23915736

  • 1. An RNA folding motif: GNRA tetraloop-receptor interactions.
    Fiore JL, Nesbitt DJ.
    Q Rev Biophys; 2013 Aug; 46(3):223-64. PubMed ID: 23915736
    [Abstract] [Full Text] [Related]

  • 2. Comprehensive features of natural and in vitro selected GNRA tetraloop-binding receptors.
    Geary C, Baudrey S, Jaeger L.
    Nucleic Acids Res; 2008 Mar; 36(4):1138-52. PubMed ID: 18158305
    [Abstract] [Full Text] [Related]

  • 3. Remarkable morphological variability of a common RNA folding motif: the GNRA tetraloop-receptor interaction.
    Abramovitz DL, Pyle AM.
    J Mol Biol; 1997 Feb 28; 266(3):493-506. PubMed ID: 9067606
    [Abstract] [Full Text] [Related]

  • 4. The GAAA tetraloop-receptor interaction contributes differentially to folding thermodynamics and kinetics for the P4-P6 RNA domain.
    Young BT, Silverman SK.
    Biochemistry; 2002 Oct 15; 41(41):12271-6. PubMed ID: 12369814
    [Abstract] [Full Text] [Related]

  • 5. A network of heterogeneous hydrogen bonds in GNRA tetraloops.
    Jucker FM, Heus HA, Yip PF, Moors EH, Pardi A.
    J Mol Biol; 1996 Dec 20; 264(5):968-80. PubMed ID: 9000624
    [Abstract] [Full Text] [Related]

  • 6. Model for an RNA tertiary interaction from the structure of an intermolecular complex between a GAAA tetraloop and an RNA helix.
    Pley HW, Flaherty KM, McKay DB.
    Nature; 1994 Nov 03; 372(6501):111-3. PubMed ID: 7526219
    [Abstract] [Full Text] [Related]

  • 7. Recognition modes of RNA tetraloops and tetraloop-like motifs by RNA-binding proteins.
    Thapar R, Denmon AP, Nikonowicz EP.
    Wiley Interdiscip Rev RNA; 2014 Nov 03; 5(1):49-67. PubMed ID: 24124096
    [Abstract] [Full Text] [Related]

  • 8. Metal ion dependence, thermodynamics, and kinetics for intramolecular docking of a GAAA tetraloop and receptor connected by a flexible linker.
    Downey CD, Fiore JL, Stoddard CD, Hodak JH, Nesbitt DJ, Pardi A.
    Biochemistry; 2006 Mar 21; 45(11):3664-73. PubMed ID: 16533049
    [Abstract] [Full Text] [Related]

  • 9. The molecular interactions that stabilize RNA tertiary structure: RNA motifs, patterns, and networks.
    Butcher SE, Pyle AM.
    Acc Chem Res; 2011 Dec 20; 44(12):1302-11. PubMed ID: 21899297
    [Abstract] [Full Text] [Related]

  • 10. A comparative study on two GNRA-tetraloop receptors: 11-nt and IC3 motifs.
    Ikawa Y, Nohmi K, Atsumi S, Shiraishi H, Inoue T.
    J Biochem; 2001 Aug 20; 130(2):251-5. PubMed ID: 11481042
    [Abstract] [Full Text] [Related]

  • 11. RNA helical packing in solution: NMR structure of a 30 kDa GAAA tetraloop-receptor complex.
    Davis JH, Tonelli M, Scott LG, Jaeger L, Williamson JR, Butcher SE.
    J Mol Biol; 2005 Aug 12; 351(2):371-82. PubMed ID: 16002091
    [Abstract] [Full Text] [Related]

  • 12. Binding of an aminoacridine derivative to a GAAA RNA tetraloop.
    Yan Z, Baranger AM.
    Bioorg Med Chem Lett; 2004 Dec 06; 14(23):5889-93. PubMed ID: 15501063
    [Abstract] [Full Text] [Related]

  • 13. Single-Molecule Fluorescence Reveals Commonalities and Distinctions among Natural and in Vitro-Selected RNA Tertiary Motifs in a Multistep Folding Pathway.
    Bonilla S, Limouse C, Bisaria N, Gebala M, Mabuchi H, Herschlag D.
    J Am Chem Soc; 2017 Dec 27; 139(51):18576-18589. PubMed ID: 29185740
    [Abstract] [Full Text] [Related]

  • 14. An in vitro-selected RNA receptor for the GAAC loop: modular receptor for non-GNRA-type tetraloop.
    Ishikawa J, Furuta H, Ikawa Y.
    Nucleic Acids Res; 2013 Apr 01; 41(6):3748-59. PubMed ID: 23382175
    [Abstract] [Full Text] [Related]

  • 15. Common and distinctive features of GNRA tetraloops based on a GUAA tetraloop structure at 1.4 A resolution.
    Correll CC, Swinger K.
    RNA; 2003 Mar 01; 9(3):355-63. PubMed ID: 12592009
    [Abstract] [Full Text] [Related]

  • 16. Solution structure of a GAAA tetraloop receptor RNA.
    Butcher SE, Dieckmann T, Feigon J.
    EMBO J; 1997 Dec 15; 16(24):7490-9. PubMed ID: 9405377
    [Abstract] [Full Text] [Related]

  • 17. UNAC tetraloops: to what extent do they mimic GNRA tetraloops?
    Zhao Q, Huang HC, Nagaswamy U, Xia Y, Gao X, Fox GE.
    Biopolymers; 2012 Aug 15; 97(8):617-28. PubMed ID: 22605553
    [Abstract] [Full Text] [Related]

  • 18. Probing the kinetic and thermodynamic consequences of the tetraloop/tetraloop receptor monovalent ion-binding site in P4-P6 RNA by smFRET.
    Bisaria N, Herschlag D.
    Biochem Soc Trans; 2015 Apr 15; 43(2):172-8. PubMed ID: 25849913
    [Abstract] [Full Text] [Related]

  • 19. Structure of a folding intermediate reveals the interplay between core and peripheral elements in RNA folding.
    Baird NJ, Westhof E, Qin H, Pan T, Sosnick TR.
    J Mol Biol; 2005 Sep 23; 352(3):712-22. PubMed ID: 16115647
    [Abstract] [Full Text] [Related]

  • 20. Quantitative analysis of the isolated GAAA tetraloop/receptor interaction in solution: a site-directed spin labeling study.
    Qin PZ, Butcher SE, Feigon J, Hubbell WL.
    Biochemistry; 2001 Jun 12; 40(23):6929-36. PubMed ID: 11389608
    [Abstract] [Full Text] [Related]

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