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Journal Abstract Search

241 related items for PubMed ID: 24075951

  • 1. Xmipp 3.0: an improved software suite for image processing in electron microscopy.
    de la Rosa-Trevín JM, Otón J, Marabini R, Zaldívar A, Vargas J, Carazo JM, Sorzano CO.
    J Struct Biol; 2013 Nov; 184(2):321-8. PubMed ID: 24075951
    [Abstract] [Full Text] [Related]

  • 2. XMIPP: a new generation of an open-source image processing package for electron microscopy.
    Sorzano CO, Marabini R, Velázquez-Muriel J, Bilbao-Castro JR, Scheres SH, Carazo JM, Pascual-Montano A.
    J Struct Biol; 2004 Nov; 148(2):194-204. PubMed ID: 15477099
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  • 3. Hybrid Electron Microscopy Normal Mode Analysis graphical interface and protocol.
    Sorzano CO, de la Rosa-Trevín JM, Tama F, Jonić S.
    J Struct Biol; 2014 Nov; 188(2):134-41. PubMed ID: 25268657
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  • 4. Bsoft: image processing and molecular modeling for electron microscopy.
    Heymann JB, Belnap DM.
    J Struct Biol; 2007 Jan; 157(1):3-18. PubMed ID: 17011211
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  • 6. Particle quality assessment and sorting for automatic and semiautomatic particle-picking techniques.
    Vargas J, Abrishami V, Marabini R, de la Rosa-Trevín JM, Zaldivar A, Carazo JM, Sorzano COS.
    J Struct Biol; 2013 Sep; 183(3):342-353. PubMed ID: 23933392
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  • 7. A method for estimating the CTF in electron microscopy based on ARMA models and parameter adjustment.
    Velázquez-Muriel JA, Sorzano CO, Fernández JJ, Carazo JM.
    Ultramicroscopy; 2003 Jul; 96(1):17-35. PubMed ID: 12623169
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  • 9. Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy.
    de la Rosa-Trevín JM, Quintana A, Del Cano L, Zaldívar A, Foche I, Gutiérrez J, Gómez-Blanco J, Burguet-Castell J, Cuenca-Alba J, Abrishami V, Vargas J, Otón J, Sharov G, Vilas JL, Navas J, Conesa P, Kazemi M, Marabini R, Sorzano CO, Carazo JM.
    J Struct Biol; 2016 Jul; 195(1):93-9. PubMed ID: 27108186
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  • 10. A statistical approach to the initial volume problem in Single Particle Analysis by Electron Microscopy.
    Sorzano CO, Vargas J, de la Rosa-Trevín JM, Otón J, Álvarez-Cabrera AL, Abrishami V, Sesmero E, Marabini R, Carazo JM.
    J Struct Biol; 2015 Mar; 189(3):213-9. PubMed ID: 25637660
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  • 11. Semiautomatic, high-throughput, high-resolution protocol for three-dimensional reconstruction of single particles in electron microscopy.
    Sorzano CO, de la Rosa Trevín JM, Otón J, Vega JJ, Cuenca J, Zaldívar-Peraza A, Gómez-Blanco J, Vargas J, Quintana A, Marabini R, Carazo JM.
    Methods Mol Biol; 2013 Mar; 950():171-93. PubMed ID: 23086876
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  • 12. A visualization and segmentation toolbox for electron microscopy.
    Pruggnaller S, Mayr M, Frangakis AS.
    J Struct Biol; 2008 Oct; 164(1):161-5. PubMed ID: 18691905
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  • 15. Advances in Xmipp for Cryo-Electron Microscopy: From Xmipp to Scipion.
    Strelak D, Jiménez-Moreno A, Vilas JL, Ramírez-Aportela E, Sánchez-García R, Maluenda D, Vargas J, Herreros D, Fernández-Giménez E, de Isidro-Gómez FP, Horacek J, Myska D, Horacek M, Conesa P, Fonseca-Reyna YC, Jiménez J, Martínez M, Harastani M, Jonić S, Filipovic J, Marabini R, Carazo JM, Sorzano COS.
    Molecules; 2021 Oct 15; 26(20):. PubMed ID: 34684805
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  • 16. Efficient initial volume determination from electron microscopy images of single particles.
    Vargas J, Álvarez-Cabrera AL, Marabini R, Carazo JM, Sorzano CO.
    Bioinformatics; 2014 Oct 15; 30(20):2891-8. PubMed ID: 24974203
    [Abstract] [Full Text] [Related]

  • 17. FASTDEF: fast defocus and astigmatism estimation for high-throughput transmission electron microscopy.
    Vargas J, Otón J, Marabini R, Jonic S, de la Rosa-Trevín JM, Carazo JM, Sorzano CO.
    J Struct Biol; 2013 Feb 15; 181(2):136-48. PubMed ID: 23261401
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  • 18. A pattern matching approach to the automatic selection of particles from low-contrast electron micrographs.
    Abrishami V, Zaldívar-Peraza A, de la Rosa-Trevín JM, Vargas J, Otón J, Marabini R, Shkolnisky Y, Carazo JM, Sorzano CO.
    Bioinformatics; 2013 Oct 01; 29(19):2460-8. PubMed ID: 23958728
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