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Journal Abstract Search

145 related items for PubMed ID: 24160839

  • 1. The distribution of word matches between Markovian sequences with periodic boundary conditions.
    Burden CJ, Leopardi P, Forêt S.
    J Comput Biol; 2014 Jan; 21(1):41-63. PubMed ID: 24160839
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  • 2. Asymptotic behaviour and optimal word size for exact and approximate word matches between random sequences.
    Forêt S, Kantorovitz MR, Burden CJ.
    BMC Bioinformatics; 2006 Dec 18; 7 Suppl 5(Suppl 5):S21. PubMed ID: 17254306
    [Abstract] [Full Text] [Related]

  • 3. Alignment-free sequence comparison for biologically realistic sequences of moderate length.
    Burden CJ, Jing J, Wilson SR.
    Stat Appl Genet Mol Biol; 2012 Dec 18; 11(1):Article 3. PubMed ID: 22624182
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  • 5. Characterizing the D2 statistic: word matches in biological sequences.
    Forêt S, Wilson SR, Burden CJ.
    Stat Appl Genet Mol Biol; 2009 Dec 18; 8():Article 43. PubMed ID: 19883369
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  • 6. Accurate statistics for local sequence alignment with position-dependent scoring by rare-event sampling.
    Wolfsheimer S, Herms I, Rahmann S, Hartmann AK.
    BMC Bioinformatics; 2011 Feb 03; 12():47. PubMed ID: 21291566
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  • 7. Identification of Words in Biological Sequences Under the Semi-Markov Hypothesis.
    Garcia-Maya BI, Limnios N.
    J Comput Biol; 2020 May 03; 27(5):683-697. PubMed ID: 31545073
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  • 9. Bayesian coestimation of phylogeny and sequence alignment.
    Lunter G, Miklós I, Drummond A, Jensen JL, Hein J.
    BMC Bioinformatics; 2005 Apr 01; 6():83. PubMed ID: 15804354
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  • 10. An overview on the distribution of word counts in Markov chains.
    Schbath S.
    J Comput Biol; 2000 Apr 01; 7(1-2):193-201. PubMed ID: 10890396
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  • 16. Effects of long-range correlations in DNA on sequence alignment score statistics.
    Messer PW, Bundschuh R, Vingron M, Arndt PF.
    J Comput Biol; 2007 Jun 01; 14(5):655-68. PubMed ID: 17683266
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  • 17. Probabilistic and statistical properties of words: an overview.
    Reinert G, Schbath S, Waterman MS.
    J Comput Biol; 2000 Jun 01; 7(1-2):1-46. PubMed ID: 10890386
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  • 18. Poisson, compound Poisson and process approximations for testing statistical significance in sequence comparisons.
    Goldstein L, Waterman MS.
    Bull Math Biol; 1992 Sep 01; 54(5):785-812. PubMed ID: 1638260
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  • 19. Probabilistic divergence measures for detecting interspecies recombination.
    Husmeier D, Wright F.
    Bioinformatics; 2001 Sep 01; 17 Suppl 1():S123-31. PubMed ID: 11473001
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  • 20. Markov model plus k-word distributions: a synergy that produces novel statistical measures for sequence comparison.
    Dai Q, Yang Y, Wang T.
    Bioinformatics; 2008 Oct 15; 24(20):2296-302. PubMed ID: 18710871
    [Abstract] [Full Text] [Related]

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