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Journal Abstract Search

213 related items for PubMed ID: 24467762

  • 1. Distance-wise pathway discovery from protein-protein interaction networks weighted by semantic similarity.
    Jaromerska S, Praus P, Cho YR.
    J Bioinform Comput Biol; 2014 Feb; 12(1):1450004. PubMed ID: 24467762
    [Abstract] [Full Text] [Related]

  • 2. P-Finder: Reconstruction of Signaling Networks from Protein-Protein Interactions and GO Annotations.
    Young-Rae Cho, Yanan Xin, Speegle G.
    IEEE/ACM Trans Comput Biol Bioinform; 2015 Feb; 12(2):309-21. PubMed ID: 26357219
    [Abstract] [Full Text] [Related]

  • 3. Alignment of PPI Networks Using Semantic Similarity for Conserved Protein Complex Prediction.
    Shui Y, Cho YR.
    IEEE Trans Nanobioscience; 2016 Jun; 15(4):380-389. PubMed ID: 28113907
    [Abstract] [Full Text] [Related]

  • 4. Survey: Enhancing protein complex prediction in PPI networks with GO similarity weighting.
    Price T, Peña FI, Cho YR.
    Interdiscip Sci; 2013 Sep; 5(3):196-210. PubMed ID: 24307411
    [Abstract] [Full Text] [Related]

  • 5. Detecting protein complexes in a PPI network: a gene ontology based multi-objective evolutionary approach.
    Mukhopadhyay A, Ray S, De M.
    Mol Biosyst; 2012 Nov; 8(11):3036-48. PubMed ID: 22990765
    [Abstract] [Full Text] [Related]

  • 6. L-GRAAL: Lagrangian graphlet-based network aligner.
    Malod-Dognin N, Pržulj N.
    Bioinformatics; 2015 Jul 01; 31(13):2182-9. PubMed ID: 25725498
    [Abstract] [Full Text] [Related]

  • 7. Functional topology in a network of protein interactions.
    Przulj N, Wigle DA, Jurisica I.
    Bioinformatics; 2004 Feb 12; 20(3):340-8. PubMed ID: 14960460
    [Abstract] [Full Text] [Related]

  • 8. Integration of anatomy ontology data with protein-protein interaction networks improves the candidate gene prediction accuracy for anatomical entities.
    Fernando PC, Mabee PM, Zeng E.
    BMC Bioinformatics; 2020 Oct 07; 21(1):442. PubMed ID: 33028186
    [Abstract] [Full Text] [Related]

  • 9. Incorporating topological information for predicting robust cancer subnetwork markers in human protein-protein interaction network.
    Khunlertgit N, Yoon BJ.
    BMC Bioinformatics; 2016 Oct 06; 17(Suppl 13):351. PubMed ID: 27766944
    [Abstract] [Full Text] [Related]

  • 10. MOEPGA: A novel method to detect protein complexes in yeast protein-protein interaction networks based on MultiObjective Evolutionary Programming Genetic Algorithm.
    Cao B, Luo J, Liang C, Wang S, Song D.
    Comput Biol Chem; 2015 Oct 06; 58():173-81. PubMed ID: 26298638
    [Abstract] [Full Text] [Related]

  • 11. Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering.
    Theofilatos K, Pavlopoulou N, Papasavvas C, Likothanassis S, Dimitrakopoulos C, Georgopoulos E, Moschopoulos C, Mavroudi S.
    Artif Intell Med; 2015 Mar 06; 63(3):181-9. PubMed ID: 25765008
    [Abstract] [Full Text] [Related]

  • 12. A density-based approach for detecting complexes in weighted PPI networks by semantic similarity.
    Zhou H, Liu J, Li J, Duan W.
    PLoS One; 2017 Mar 06; 12(7):e0180570. PubMed ID: 28704455
    [Abstract] [Full Text] [Related]

  • 13. Identifying protein complexes based on the integration of PPI network and gene expression data.
    Chen W, Li M, Wu X, Wang J.
    Int J Bioinform Res Appl; 2015 Mar 06; 11(1):30-44. PubMed ID: 25667384
    [Abstract] [Full Text] [Related]

  • 14. Construction of dynamic probabilistic protein interaction networks for protein complex identification.
    Zhang Y, Lin H, Yang Z, Wang J.
    BMC Bioinformatics; 2016 Apr 27; 17(1):186. PubMed ID: 27117946
    [Abstract] [Full Text] [Related]

  • 15. Topological and functional comparison of community detection algorithms in biological networks.
    Rahiminejad S, Maurya MR, Subramaniam S.
    BMC Bioinformatics; 2019 Apr 27; 20(1):212. PubMed ID: 31029085
    [Abstract] [Full Text] [Related]

  • 16. Fitting a geometric graph to a protein-protein interaction network.
    Higham DJ, Rasajski M, Przulj N.
    Bioinformatics; 2008 Apr 15; 24(8):1093-9. PubMed ID: 18344248
    [Abstract] [Full Text] [Related]

  • 17. Impact of low-confidence interactions on computational identification of protein complexes.
    Paul M, Anand A.
    J Bioinform Comput Biol; 2020 Aug 15; 18(4):2050025. PubMed ID: 32757809
    [Abstract] [Full Text] [Related]

  • 18. Identification of Essential Proteins Based on Improved HITS Algorithm.
    Lei X, Wang S, Wu F.
    Genes (Basel); 2019 Feb 25; 10(2):. PubMed ID: 30823614
    [Abstract] [Full Text] [Related]

  • 19. Protein complex detection in PPI networks based on data integration and supervised learning method.
    Yu F, Yang Z, Hu X, Sun Y, Lin H, Wang J.
    BMC Bioinformatics; 2015 Feb 25; 16 Suppl 12(Suppl 12):S3. PubMed ID: 26329886
    [Abstract] [Full Text] [Related]

  • 20. The Intrinsic Geometric Structure of Protein-Protein Interaction Networks for Protein Interaction Prediction.
    Fang Y, Sun M, Dai G, Ramain K.
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Feb 25; 13(1):76-85. PubMed ID: 26886733
    [Abstract] [Full Text] [Related]

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