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Journal Abstract Search

272 related items for PubMed ID: 24755918

  • 1. Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia.
    Hugerth LW, Muller EE, Hu YO, Lebrun LA, Roume H, Lundin D, Wilmes P, Andersson AF.
    PLoS One; 2014; 9(4):e95567. PubMed ID: 24755918
    [Abstract] [Full Text] [Related]

  • 2. Characterization of the 18S rRNA gene for designing universal eukaryote specific primers.
    Hadziavdic K, Lekang K, Lanzen A, Jonassen I, Thompson EM, Troedsson C.
    PLoS One; 2014; 9(2):e87624. PubMed ID: 24516555
    [Abstract] [Full Text] [Related]

  • 3. Comparative analyses of the V4 and V9 regions of 18S rDNA for the extant eukaryotic community using the Illumina platform.
    Choi J, Park JS.
    Sci Rep; 2020 Apr 16; 10(1):6519. PubMed ID: 32300168
    [Abstract] [Full Text] [Related]

  • 4. Short- and long-read metabarcoding of the eukaryotic rRNA operon: Evaluation of primers and comparison to shotgun metagenomics sequencing.
    Latz MAC, Grujcic V, Brugel S, Lycken J, John U, Karlson B, Andersson A, Andersson AF.
    Mol Ecol Resour; 2022 Aug 16; 22(6):2304-2318. PubMed ID: 35437888
    [Abstract] [Full Text] [Related]

  • 5. A comprehensive fungi-specific 18S rRNA gene sequence primer toolkit suited for diverse research issues and sequencing platforms.
    Banos S, Lentendu G, Kopf A, Wubet T, Glöckner FO, Reich M.
    BMC Microbiol; 2018 Nov 20; 18(1):190. PubMed ID: 30458701
    [Abstract] [Full Text] [Related]

  • 6. Measurements of soil protist richness and community composition are influenced by primer pair, annealing temperature, and bioinformatics choices.
    Mau RL, Hayer M, Purcell AM, Geisen S, Hungate BA, Schwartz E.
    Appl Environ Microbiol; 2024 Jul 24; 90(7):e0080024. PubMed ID: 38920364
    [Abstract] [Full Text] [Related]

  • 7. Analysis of fungal diversity in the wheat rhizosphere by sequencing of cloned PCR-amplified genes encoding 18S rRNA and temperature gradient gel electrophoresis.
    Smit E, Leeflang P, Glandorf B, van Elsas JD, Wernars K.
    Appl Environ Microbiol; 1999 Jun 24; 65(6):2614-21. PubMed ID: 10347051
    [Abstract] [Full Text] [Related]

  • 8. Improved 18S and 28S rDNA primer sets for NGS-based parasite detection.
    Kounosu A, Murase K, Yoshida A, Maruyama H, Kikuchi T.
    Sci Rep; 2019 Oct 31; 9(1):15789. PubMed ID: 31673037
    [Abstract] [Full Text] [Related]

  • 9. Design and Evaluation of Illumina MiSeq-Compatible, 18S rRNA Gene-Specific Primers for Improved Characterization of Mixed Phototrophic Communities.
    Bradley IM, Pinto AJ, Guest JS.
    Appl Environ Microbiol; 2016 Oct 01; 82(19):5878-91. PubMed ID: 27451454
    [Abstract] [Full Text] [Related]

  • 10. Potential bias of fungal 18S rDNA and internal transcribed spacer polymerase chain reaction primers for estimating fungal biodiversity in soil.
    Anderson IC, Campbell CD, Prosser JI.
    Environ Microbiol; 2003 Jan 01; 5(1):36-47. PubMed ID: 12542711
    [Abstract] [Full Text] [Related]

  • 11. Comparing High-throughput Platforms for Sequencing the V4 Region of SSU-rDNA in Environmental Microbial Eukaryotic Diversity Surveys.
    Mahé F, Mayor J, Bunge J, Chi J, Siemensmeyer T, Stoeck T, Wahl B, Paprotka T, Filker S, Dunthorn M.
    J Eukaryot Microbiol; 2015 Jan 01; 62(3):338-45. PubMed ID: 25312509
    [Abstract] [Full Text] [Related]

  • 12. Long-read metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity.
    Jamy M, Foster R, Barbera P, Czech L, Kozlov A, Stamatakis A, Bending G, Hilton S, Bass D, Burki F.
    Mol Ecol Resour; 2020 Mar 01; 20(2):429-443. PubMed ID: 31705734
    [Abstract] [Full Text] [Related]

  • 13. Annotated 18S and 28S rDNA reference sequences of taxa in the planktonic diatom family Chaetocerotaceae.
    Gaonkar CC, Piredda R, Minucci C, Mann DG, Montresor M, Sarno D, Kooistra WHCF.
    PLoS One; 2018 Mar 01; 13(12):e0208929. PubMed ID: 30586452
    [Abstract] [Full Text] [Related]

  • 14. PCR amplification of a long rDNA segment with one primer pair in agriculturally important nematodes.
    Carta LK, Li S.
    J Nematol; 2019 Mar 01; 51():1-8. PubMed ID: 31157959
    [Abstract] [Full Text] [Related]

  • 15. Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies.
    Klindworth A, Pruesse E, Schweer T, Peplies J, Quast C, Horn M, Glöckner FO.
    Nucleic Acids Res; 2013 Jan 07; 41(1):e1. PubMed ID: 22933715
    [Abstract] [Full Text] [Related]

  • 16. Optimal eukaryotic 18S and universal 16S/18S ribosomal RNA primers and their application in a study of symbiosis.
    Wang Y, Tian RM, Gao ZM, Bougouffa S, Qian PY.
    PLoS One; 2014 Jan 07; 9(3):e90053. PubMed ID: 24594623
    [Abstract] [Full Text] [Related]

  • 17. Primer Design for an Accurate View of Picocyanobacterial Community Structure by Using High-Throughput Sequencing.
    Huber P, Cornejo-Castillo FM, Ferrera I, Sánchez P, Logares R, Metz S, Balagué V, Acinas SG, Gasol JM, Unrein F.
    Appl Environ Microbiol; 2019 Apr 01; 85(7):. PubMed ID: 30709827
    [Abstract] [Full Text] [Related]

  • 18. Intracellular diversity of the V4 and V9 regions of the 18S rRNA in marine protists (radiolarians) assessed by high-throughput sequencing.
    Decelle J, Romac S, Sasaki E, Not F, Mahé F.
    PLoS One; 2014 Apr 01; 9(8):e104297. PubMed ID: 25090095
    [Abstract] [Full Text] [Related]

  • 19. Soil clone library analyses to evaluate specificity and selectivity of PCR primers targeting fungal 18S rDNA for denaturing-gradient gel electrophoresis (DGGE).
    Takada Hoshino Y, Morimoto S.
    Microbes Environ; 2010 Apr 01; 25(4):281-7. PubMed ID: 21576883
    [Abstract] [Full Text] [Related]

  • 20. Primer, Pipelines, Parameters: Issues in 16S rRNA Gene Sequencing.
    Abellan-Schneyder I, Matchado MS, Reitmeier S, Sommer A, Sewald Z, Baumbach J, List M, Neuhaus K.
    mSphere; 2021 Feb 24; 6(1):. PubMed ID: 33627512
    [Abstract] [Full Text] [Related]

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