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Journal Abstract Search

155 related items for PubMed ID: 24818139

  • 21. Identification of functional modules in a PPI network by clique percolation clustering.
    Zhang S, Ning X, Zhang XS.
    Comput Biol Chem; 2006 Dec; 30(6):445-51. PubMed ID: 17098476
    [Abstract] [Full Text] [Related]

  • 22. Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks.
    Liu X, Yang Z, Sang S, Zhou Z, Wang L, Zhang Y, Lin H, Wang J, Xu B.
    BMC Bioinformatics; 2018 Sep 21; 19(1):332. PubMed ID: 30241459
    [Abstract] [Full Text] [Related]

  • 23. Markov clustering versus affinity propagation for the partitioning of protein interaction graphs.
    Vlasblom J, Wodak SJ.
    BMC Bioinformatics; 2009 Mar 30; 10():99. PubMed ID: 19331680
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  • 24. Protein complex prediction in interaction network based on network motif.
    Patra S, Mohapatra A.
    Comput Biol Chem; 2020 Dec 30; 89():107399. PubMed ID: 33152665
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  • 25. Popular computational methods to assess multiprotein complexes derived from label-free affinity purification and mass spectrometry (AP-MS) experiments.
    Armean IM, Lilley KS, Trotter MW.
    Mol Cell Proteomics; 2013 Jan 30; 12(1):1-13. PubMed ID: 23071097
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  • 26. Detecting Protein Complexes Based on Uncertain Graph Model.
    Zhao B, Wang J, Li M, Wu FX, Pan Y.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Jan 30; 11(3):486-97. PubMed ID: 26356017
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  • 27. Protein complex detection using interaction reliability assessment and weighted clustering coefficient.
    Zaki N, Efimov D, Berengueres J.
    BMC Bioinformatics; 2013 May 20; 14():163. PubMed ID: 23688127
    [Abstract] [Full Text] [Related]

  • 28. Discover protein complexes in protein-protein interaction networks using parametric local modularity.
    Kim J, Tan K.
    BMC Bioinformatics; 2010 Oct 19; 11():521. PubMed ID: 20958996
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  • 29. Improved method for protein complex detection using bottleneck proteins.
    Ahn J, Lee DH, Yoon Y, Yeu Y, Park S.
    BMC Med Inform Decis Mak; 2013 Oct 19; 13 Suppl 1(Suppl 1):S5. PubMed ID: 23566214
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  • 30. Characterization and prediction of protein-protein interactions within and between complexes.
    Sprinzak E, Altuvia Y, Margalit H.
    Proc Natl Acad Sci U S A; 2006 Oct 03; 103(40):14718-23. PubMed ID: 17003128
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  • 31. Protein complex prediction with RNSC.
    King AD, Pržulj N, Jurisica I.
    Methods Mol Biol; 2012 Oct 03; 804():297-312. PubMed ID: 22144160
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  • 32. Noise reduction in protein-protein interaction graphs by the implementation of a novel weighting scheme.
    Kritikos GD, Moschopoulos C, Vazirgiannis M, Kossida S.
    BMC Bioinformatics; 2011 Jun 16; 12():239. PubMed ID: 21679454
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  • 33. Protein Complexes Prediction Method Based on Core-Attachment Structure and Functional Annotations.
    Li B, Liao B.
    Int J Mol Sci; 2017 Sep 06; 18(9):. PubMed ID: 28878201
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  • 34. Efficiently Detecting Protein Complexes from Protein Interaction Networks via Alternating Direction Method of Multipliers.
    Hu L, Yuan X, Liu X, Xiong S, Luo X.
    IEEE/ACM Trans Comput Biol Bioinform; 2019 Sep 06; 16(6):1922-1935. PubMed ID: 29994334
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  • 35. Development and implementation of an algorithm for detection of protein complexes in large interaction networks.
    Altaf-Ul-Amin M, Shinbo Y, Mihara K, Kurokawa K, Kanaya S.
    BMC Bioinformatics; 2006 Apr 14; 7():207. PubMed ID: 16613608
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  • 36. A novel link prediction algorithm for reconstructing protein-protein interaction networks by topological similarity.
    Lei C, Ruan J.
    Bioinformatics; 2013 Feb 01; 29(3):355-64. PubMed ID: 23235927
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  • 37. Identifying protein complexes in protein-protein interaction networks by using clique seeds and graph entropy.
    Chen B, Shi J, Zhang S, Wu FX.
    Proteomics; 2013 Jan 01; 13(2):269-77. PubMed ID: 23112006
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  • 38. Identification of Essential Proteins Based on a New Combination of Local Interaction Density and Protein Complexes.
    Luo J, Qi Y.
    PLoS One; 2015 Jan 01; 10(6):e0131418. PubMed ID: 26125187
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  • 39. Supervised maximum-likelihood weighting of composite protein networks for complex prediction.
    Yong CH, Liu G, Chua HN, Wong L.
    BMC Syst Biol; 2012 Jan 01; 6 Suppl 2(Suppl 2):S13. PubMed ID: 23281936
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  • 40. Identifying protein complexes and functional modules--from static PPI networks to dynamic PPI networks.
    Chen B, Fan W, Liu J, Wu FX.
    Brief Bioinform; 2014 Mar 01; 15(2):177-94. PubMed ID: 23780996
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