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Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

141 related items for PubMed ID: 24860165

  • 1.
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  • 2. Genome Surveyor 2.0: cis-regulatory analysis in Drosophila.
    Kazemian M, Brodsky MH, Sinha S.
    Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W79-85. PubMed ID: 21593125
    [Abstract] [Full Text] [Related]

  • 3. Inferring direct DNA binding from ChIP-seq.
    Bailey TL, Machanick P.
    Nucleic Acids Res; 2012 Sep 01; 40(17):e128. PubMed ID: 22610855
    [Abstract] [Full Text] [Related]

  • 4. Differential motif enrichment analysis of paired ChIP-seq experiments.
    Lesluyes T, Johnson J, Machanick P, Bailey TL.
    BMC Genomics; 2014 Sep 02; 15(1):752. PubMed ID: 25179504
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  • 6. TrawlerWeb: an online de novo motif discovery tool for next-generation sequencing datasets.
    Dang LT, Tondl M, Chiu MHH, Revote J, Paten B, Tano V, Tokolyi A, Besse F, Quaife-Ryan G, Cumming H, Drvodelic MJ, Eichenlaub MP, Hallab JC, Stolper JS, Rossello FJ, Bogoyevitch MA, Jans DA, Nim HT, Porrello ER, Hudson JE, Ramialison M.
    BMC Genomics; 2018 Apr 05; 19(1):238. PubMed ID: 29621972
    [Abstract] [Full Text] [Related]

  • 7. MEDEA: analysis of transcription factor binding motifs in accessible chromatin.
    Mariani L, Weinand K, Gisselbrecht SS, Bulyk ML.
    Genome Res; 2020 May 05; 30(5):736-748. PubMed ID: 32424069
    [Abstract] [Full Text] [Related]

  • 8. LASAGNA-Search: an integrated web tool for transcription factor binding site search and visualization.
    Lee C, Huang CH.
    Biotechniques; 2013 Mar 05; 54(3):141-53. PubMed ID: 23599922
    [Abstract] [Full Text] [Related]

  • 9. MEME-ChIP: motif analysis of large DNA datasets.
    Machanick P, Bailey TL.
    Bioinformatics; 2011 Jun 15; 27(12):1696-7. PubMed ID: 21486936
    [Abstract] [Full Text] [Related]

  • 10. PscanChIP: Finding over-represented transcription factor-binding site motifs and their correlations in sequences from ChIP-Seq experiments.
    Zambelli F, Pesole G, Pavesi G.
    Nucleic Acids Res; 2013 Jul 15; 41(Web Server issue):W535-43. PubMed ID: 23748563
    [Abstract] [Full Text] [Related]

  • 11. Factorbook.org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium.
    Wang J, Zhuang J, Iyer S, Lin XY, Greven MC, Kim BH, Moore J, Pierce BG, Dong X, Virgil D, Birney E, Hung JH, Weng Z.
    Nucleic Acids Res; 2013 Jan 15; 41(Database issue):D171-6. PubMed ID: 23203885
    [Abstract] [Full Text] [Related]

  • 12. SIOMICS: a novel approach for systematic identification of motifs in ChIP-seq data.
    Ding J, Hu H, Li X.
    Nucleic Acids Res; 2014 Mar 15; 42(5):e35. PubMed ID: 24322294
    [Abstract] [Full Text] [Related]

  • 13. DMINDA: an integrated web server for DNA motif identification and analyses.
    Ma Q, Zhang H, Mao X, Zhou C, Liu B, Chen X, Xu Y.
    Nucleic Acids Res; 2014 Jul 15; 42(Web Server issue):W12-9. PubMed ID: 24753419
    [Abstract] [Full Text] [Related]

  • 14. RSAT 2015: Regulatory Sequence Analysis Tools.
    Medina-Rivera A, Defrance M, Sand O, Herrmann C, Castro-Mondragon JA, Delerce J, Jaeger S, Blanchet C, Vincens P, Caron C, Staines DM, Contreras-Moreira B, Artufel M, Charbonnier-Khamvongsa L, Hernandez C, Thieffry D, Thomas-Chollier M, van Helden J.
    Nucleic Acids Res; 2015 Jul 01; 43(W1):W50-6. PubMed ID: 25904632
    [Abstract] [Full Text] [Related]

  • 15. MotifLab: a tools and data integration workbench for motif discovery and regulatory sequence analysis.
    Klepper K, Drabløs F.
    BMC Bioinformatics; 2013 Jan 16; 14():9. PubMed ID: 23323883
    [Abstract] [Full Text] [Related]

  • 16. Systematic discovery and characterization of regulatory motifs in ENCODE TF binding experiments.
    Kheradpour P, Kellis M.
    Nucleic Acids Res; 2014 Mar 16; 42(5):2976-87. PubMed ID: 24335146
    [Abstract] [Full Text] [Related]

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  • 19. YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities.
    de Boer CG, Hughes TR.
    Nucleic Acids Res; 2012 Jan 16; 40(Database issue):D169-79. PubMed ID: 22102575
    [Abstract] [Full Text] [Related]

  • 20.
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