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188 related items for PubMed ID: 24933471

  • 1. Pressure-Dependent Properties of Elementary Hydrophobic Interactions: Ramifications for Activation Properties of Protein Folding.
    Dias CL, Chan HS.
    J Phys Chem B; 2014 Jul 10; 118(27):7488-7509. PubMed ID: 24933471
    [Abstract] [Full Text] [Related]

  • 2. Pressure and temperature dependence of hydrophobic hydration: volumetric, compressibility, and thermodynamic signatures.
    Moghaddam MS, Chan HS.
    J Chem Phys; 2007 Mar 21; 126(11):114507. PubMed ID: 17381220
    [Abstract] [Full Text] [Related]

  • 3. Temperature dependence of three-body hydrophobic interactions: potential of mean force, enthalpy, entropy, heat capacity, and nonadditivity.
    Moghaddam MS, Shimizu S, Chan HS.
    J Am Chem Soc; 2005 Jan 12; 127(1):303-16. PubMed ID: 15631480
    [Abstract] [Full Text] [Related]

  • 4. Origins of protein denatured state compactness and hydrophobic clustering in aqueous urea: inferences from nonpolar potentials of mean force.
    Shimizu S, Chan HS.
    Proteins; 2002 Dec 01; 49(4):560-6. PubMed ID: 12402364
    [Abstract] [Full Text] [Related]

  • 5. Molecular dynamics simulations of pressure effects on hydrophobic interactions.
    Ghosh T, García AE, Garde S.
    J Am Chem Soc; 2001 Nov 07; 123(44):10997-1003. PubMed ID: 11686704
    [Abstract] [Full Text] [Related]

  • 6. Potential of mean force of hydrophobic association: dependence on solute size.
    Sobolewski E, Makowski M, Czaplewski C, Liwo A, Ołdziej S, Scheraga HA.
    J Phys Chem B; 2007 Sep 13; 111(36):10765-74. PubMed ID: 17713937
    [Abstract] [Full Text] [Related]

  • 7. Towards temperature-dependent coarse-grained potentials of side-chain interactions for protein folding simulations. I: molecular dynamics study of a pair of methane molecules in water at various temperatures.
    Sobolewski E, Makowski M, Oldziej S, Czaplewski C, Liwo A, Scheraga HA.
    Protein Eng Des Sel; 2009 Sep 13; 22(9):547-52. PubMed ID: 19556395
    [Abstract] [Full Text] [Related]

  • 8. Studying pressure denaturation of a protein by molecular dynamics simulations.
    Sarupria S, Ghosh T, García AE, Garde S.
    Proteins; 2010 May 15; 78(7):1641-51. PubMed ID: 20146357
    [Abstract] [Full Text] [Related]

  • 9. Pressure-jump studies of the folding/unfolding of trp repressor.
    Desai G, Panick G, Zein M, Winter R, Royer CA.
    J Mol Biol; 1999 May 07; 288(3):461-75. PubMed ID: 10329154
    [Abstract] [Full Text] [Related]

  • 10. Anti-cooperativity and cooperativity in hydrophobic interactions: Three-body free energy landscapes and comparison with implicit-solvent potential functions for proteins.
    Shimizu S, Chan HS.
    Proteins; 2002 Jul 01; 48(1):15-30. PubMed ID: 12012334
    [Abstract] [Full Text] [Related]

  • 11. Potential of mean force between hydrophobic solutes in the Jagla model of water and implications for cold denaturation of proteins.
    Maiti M, Weiner S, Buldyrev SV, Stanley HE, Sastry S.
    J Chem Phys; 2012 Jan 28; 136(4):044512. PubMed ID: 22299896
    [Abstract] [Full Text] [Related]

  • 12. Protein hydration and unfolding--insights from experimental partial specific volumes and unfolded protein models.
    Murphy LR, Matubayasi N, Payne VA, Levy RM.
    Fold Des; 1998 Jan 28; 3(2):105-18. PubMed ID: 9565755
    [Abstract] [Full Text] [Related]

  • 13. Volume, expansivity and isothermal compressibility changes associated with temperature and pressure unfolding of Staphylococcal nuclease.
    Seemann H, Winter R, Royer CA.
    J Mol Biol; 2001 Apr 06; 307(4):1091-102. PubMed ID: 11286558
    [Abstract] [Full Text] [Related]

  • 14. Molecular simulation study of cooperativity in hydrophobic association: clusters of four hydrophobic particles.
    Czaplewski C, Rodziewicz-Motowidło S, Dabal M, Liwo A, Ripoll DR, Scheraga HA.
    Biophys Chem; 2003 Sep 06; 105(2-3):339-59. PubMed ID: 14499903
    [Abstract] [Full Text] [Related]

  • 15. A nucleation-based method to study hydrophobic interactions under confinement: enhanced hydrophobic association driven by energetic contributions.
    Kim H, Keasler SJ, Chen B.
    J Phys Chem B; 2014 Jun 19; 118(24):6875-84. PubMed ID: 24853272
    [Abstract] [Full Text] [Related]

  • 16. Probing the transition state ensemble of a protein folding reaction by pressure-dependent NMR relaxation dispersion.
    Korzhnev DM, Bezsonova I, Evanics F, Taulier N, Zhou Z, Bai Y, Chalikian TV, Prosser RS, Kay LE.
    J Am Chem Soc; 2006 Apr 19; 128(15):5262-9. PubMed ID: 16608362
    [Abstract] [Full Text] [Related]

  • 17. Investigation of the salting out of methane from aqueous electrolyte solutions using computer simulations.
    Docherty H, Galindo A, Sanz E, Vega C.
    J Phys Chem B; 2007 Aug 02; 111(30):8993-9000. PubMed ID: 17595128
    [Abstract] [Full Text] [Related]

  • 18. The hydration of globular proteins as derived from volume and compressibility measurements: cross correlating thermodynamic and structural data.
    Chalikian TV, Totrov M, Abagyan R, Breslauer KJ.
    J Mol Biol; 1996 Jul 26; 260(4):588-603. PubMed ID: 8759322
    [Abstract] [Full Text] [Related]

  • 19. Partial volumes and compressibilities of extended polypeptide chains in aqueous solution: additivity scheme and implication of protein unfolding at normal and high pressure.
    Kharakoz DP.
    Biochemistry; 1997 Aug 19; 36(33):10276-85. PubMed ID: 9254626
    [Abstract] [Full Text] [Related]

  • 20. Energy barriers, cooperativity, and hidden intermediates in the folding of small proteins.
    Bai Y.
    Biochem Biophys Res Commun; 2006 Feb 17; 340(3):976-83. PubMed ID: 16405866
    [Abstract] [Full Text] [Related]

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