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221 related items for PubMed ID: 25043149

  • 1. Energetic tuning by tRNA modifications ensures correct decoding of isoleucine and methionine on the ribosome.
    Satpati P, Bauer P, Aqvist J.
    Chemistry; 2014 Aug 11; 20(33):10271-5. PubMed ID: 25043149
    [Abstract] [Full Text] [Related]

  • 2. Convergent evolution of AUA decoding in bacteria and archaea.
    Suzuki T, Numata T.
    RNA Biol; 2014 Aug 11; 11(12):1586-96. PubMed ID: 25629511
    [Abstract] [Full Text] [Related]

  • 3. Mechanisms of the tRNA wobble cytidine modification essential for AUA codon decoding in prokaryotes.
    Numata T.
    Biosci Biotechnol Biochem; 2015 Aug 11; 79(3):347-53. PubMed ID: 25348586
    [Abstract] [Full Text] [Related]

  • 4. The structural basis for specific decoding of AUA by isoleucine tRNA on the ribosome.
    Voorhees RM, Mandal D, Neubauer C, Köhrer C, RajBhandary UL, Ramakrishnan V.
    Nat Struct Mol Biol; 2013 May 11; 20(5):641-3. PubMed ID: 23542153
    [Abstract] [Full Text] [Related]

  • 5. Identification and codon reading properties of 5-cyanomethyl uridine, a new modified nucleoside found in the anticodon wobble position of mutant haloarchaeal isoleucine tRNAs.
    Mandal D, Köhrer C, Su D, Babu IR, Chan CT, Liu Y, Söll D, Blum P, Kuwahara M, Dedon PC, Rajbhandary UL.
    RNA; 2014 Feb 11; 20(2):177-88. PubMed ID: 24344322
    [Abstract] [Full Text] [Related]

  • 6. tRNA's wobble decoding of the genome: 40 years of modification.
    Agris PF, Vendeix FA, Graham WD.
    J Mol Biol; 2007 Feb 09; 366(1):1-13. PubMed ID: 17187822
    [Abstract] [Full Text] [Related]

  • 7. Structural insights into the decoding capability of isoleucine tRNAs with lysidine and agmatidine.
    Akiyama N, Ishiguro K, Yokoyama T, Miyauchi K, Nagao A, Shirouzu M, Suzuki T.
    Nat Struct Mol Biol; 2024 May 09; 31(5):817-825. PubMed ID: 38538915
    [Abstract] [Full Text] [Related]

  • 8. Agmatine-conjugated cytidine in a tRNA anticodon is essential for AUA decoding in archaea.
    Ikeuchi Y, Kimura S, Numata T, Nakamura D, Yokogawa T, Ogata T, Wada T, Suzuki T, Suzuki T.
    Nat Chem Biol; 2010 Apr 09; 6(4):277-82. PubMed ID: 20139989
    [Abstract] [Full Text] [Related]

  • 9. Expanded use of sense codons is regulated by modified cytidines in tRNA.
    Cantara WA, Murphy FV, Demirci H, Agris PF.
    Proc Natl Acad Sci U S A; 2013 Jul 02; 110(27):10964-9. PubMed ID: 23781103
    [Abstract] [Full Text] [Related]

  • 10. Agmatidine, a modified cytidine in the anticodon of archaeal tRNA(Ile), base pairs with adenosine but not with guanosine.
    Mandal D, Köhrer C, Su D, Russell SP, Krivos K, Castleberry CM, Blum P, Limbach PA, Söll D, RajBhandary UL.
    Proc Natl Acad Sci U S A; 2010 Feb 16; 107(7):2872-7. PubMed ID: 20133752
    [Abstract] [Full Text] [Related]

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  • 12. The human mitochondrial tRNAMet: structure/function relationship of a unique modification in the decoding of unconventional codons.
    Bilbille Y, Gustilo EM, Harris KA, Jones CN, Lusic H, Kaiser RJ, Delaney MO, Spremulli LL, Deiters A, Agris PF.
    J Mol Biol; 2011 Feb 18; 406(2):257-74. PubMed ID: 21168417
    [Abstract] [Full Text] [Related]

  • 13. Structures of the ribosome bound to EF-Tu-isoleucine tRNA elucidate the mechanism of AUG avoidance.
    Rybak MY, Gagnon MG.
    Nat Struct Mol Biol; 2024 May 18; 31(5):810-816. PubMed ID: 38538914
    [Abstract] [Full Text] [Related]

  • 14. The influence of hypermodified nucleosides lysidine and t(6)A to recognize the AUA codon instead of AUG: a molecular dynamics simulation study.
    Sonawane KD, Sambhare SB.
    Integr Biol (Camb); 2015 Nov 18; 7(11):1387-95. PubMed ID: 26215455
    [Abstract] [Full Text] [Related]

  • 15. Evolution of the mitochondrial genetic code. II. Reassignment of codon AUA from isoleucine to methionine.
    Osawa S, Ohama T, Jukes TH, Watanabe K, Yokoyama S.
    J Mol Evol; 1989 Nov 18; 29(5):373-80. PubMed ID: 2515289
    [Abstract] [Full Text] [Related]

  • 16. Life without the essential bacterial tRNA Ile2-lysidine synthetase TilS: a case of tRNA gene recruitment in Bacillus subtilis.
    Fabret C, Dervyn E, Dalmais B, Guillot A, Marck C, Grosjean H, Noirot P.
    Mol Microbiol; 2011 May 18; 80(4):1062-74. PubMed ID: 21435031
    [Abstract] [Full Text] [Related]

  • 17. Identification and characterization of a tRNA decoding the rare AUA codon in Haloarcula marismortui.
    Köhrer C, Srinivasan G, Mandal D, Mallick B, Ghosh Z, Chakrabarti J, Rajbhandary UL.
    RNA; 2008 Jan 18; 14(1):117-26. PubMed ID: 17998287
    [Abstract] [Full Text] [Related]

  • 18. The Importance of Being Modified: The Role of RNA Modifications in Translational Fidelity.
    Agris PF, Narendran A, Sarachan K, Väre VYP, Eruysal E.
    Enzymes; 2017 Jan 18; 41():1-50. PubMed ID: 28601219
    [Abstract] [Full Text] [Related]

  • 19. Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code.
    Rozov A, Demeshkina N, Khusainov I, Westhof E, Yusupov M, Yusupova G.
    Nat Commun; 2016 Jan 21; 7():10457. PubMed ID: 26791911
    [Abstract] [Full Text] [Related]

  • 20. An operational RNA code for faithful assignment of AUG triplets to methionine.
    Jones TE, Brown CL, Geslain R, Alexander RW, Ribas de Pouplana L.
    Mol Cell; 2008 Feb 15; 29(3):401-7. PubMed ID: 18280245
    [Abstract] [Full Text] [Related]

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