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Journal Abstract Search

342 related items for PubMed ID: 25161252

  • 1. Integration of molecular network data reconstructs Gene Ontology.
    Gligorijević V, Janjić V, Pržulj N.
    Bioinformatics; 2014 Sep 01; 30(17):i594-600. PubMed ID: 25161252
    [Abstract] [Full Text] [Related]

  • 2. Topology-function conservation in protein-protein interaction networks.
    Davis D, Yaveroğlu ÖN, Malod-Dognin N, Stojmirovic A, Pržulj N.
    Bioinformatics; 2015 May 15; 31(10):1632-9. PubMed ID: 25609797
    [Abstract] [Full Text] [Related]

  • 3. Measuring semantic similarities by combining gene ontology annotations and gene co-function networks.
    Peng J, Uygun S, Kim T, Wang Y, Rhee SY, Chen J.
    BMC Bioinformatics; 2015 Feb 14; 16():44. PubMed ID: 25886899
    [Abstract] [Full Text] [Related]

  • 4. L-GRAAL: Lagrangian graphlet-based network aligner.
    Malod-Dognin N, Pržulj N.
    Bioinformatics; 2015 Jul 01; 31(13):2182-9. PubMed ID: 25725498
    [Abstract] [Full Text] [Related]

  • 5. Extending gene ontology with gene association networks.
    Peng J, Wang T, Wang J, Wang Y, Chen J.
    Bioinformatics; 2016 Apr 15; 32(8):1185-94. PubMed ID: 26644414
    [Abstract] [Full Text] [Related]

  • 6. Identifying cross-category relations in gene ontology and constructing genome-specific term association networks.
    Peng J, Chen J, Wang Y.
    BMC Bioinformatics; 2013 Apr 15; 14 Suppl 2(Suppl 2):S15. PubMed ID: 23368677
    [Abstract] [Full Text] [Related]

  • 7. Identifying term relations cross different gene ontology categories.
    Peng J, Wang H, Lu J, Hui W, Wang Y, Shang X.
    BMC Bioinformatics; 2017 Dec 28; 18(Suppl 16):573. PubMed ID: 29297309
    [Abstract] [Full Text] [Related]

  • 8. Multi-Factored Gene-Gene Proximity Measures Exploiting Biological Knowledge Extracted from Gene Ontology: Application in Gene Clustering.
    Acharya S, Saha S, Pradhan P.
    IEEE/ACM Trans Comput Biol Bioinform; 2020 Dec 28; 17(1):207-219. PubMed ID: 29994130
    [Abstract] [Full Text] [Related]

  • 9. Information theory applied to the sparse gene ontology annotation network to predict novel gene function.
    Tao Y, Sam L, Li J, Friedman C, Lussier YA.
    Bioinformatics; 2007 Jul 01; 23(13):i529-38. PubMed ID: 17646340
    [Abstract] [Full Text] [Related]

  • 10. Modular biological function is most effectively captured by combining molecular interaction data types.
    Ames RM, Macpherson JI, Pinney JW, Lovell SC, Robertson DL.
    PLoS One; 2013 Jul 01; 8(5):e62670. PubMed ID: 23658761
    [Abstract] [Full Text] [Related]

  • 11. Integrative network alignment reveals large regions of global network similarity in yeast and human.
    Kuchaiev O, Przulj N.
    Bioinformatics; 2011 May 15; 27(10):1390-6. PubMed ID: 21414992
    [Abstract] [Full Text] [Related]

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  • 13. IntelliGO: a new vector-based semantic similarity measure including annotation origin.
    Benabderrahmane S, Smail-Tabbone M, Poch O, Napoli A, Devignes MD.
    BMC Bioinformatics; 2010 Dec 01; 11():588. PubMed ID: 21122125
    [Abstract] [Full Text] [Related]

  • 14. Fuse: multiple network alignment via data fusion.
    Gligorijević V, Malod-Dognin N, Pržulj N.
    Bioinformatics; 2016 Apr 15; 32(8):1195-203. PubMed ID: 26668003
    [Abstract] [Full Text] [Related]

  • 15. Automatic extraction of gene ontology annotation and its correlation with clusters in protein networks.
    Daraselia N, Yuryev A, Egorov S, Mazo I, Ispolatov I.
    BMC Bioinformatics; 2007 Jul 10; 8():243. PubMed ID: 17620146
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  • 18. CvManGO, a method for leveraging computational predictions to improve literature-based Gene Ontology annotations.
    Park J, Costanzo MC, Balakrishnan R, Cherry JM, Hong EL.
    Database (Oxford); 2012 Jul 10; 2012():bas001. PubMed ID: 22434836
    [Abstract] [Full Text] [Related]

  • 19. GO functional similarity clustering depends on similarity measure, clustering method, and annotation completeness.
    Liu M, Thomas PD.
    BMC Bioinformatics; 2019 Mar 27; 20(1):155. PubMed ID: 30917779
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