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Journal Abstract Search

121 related items for PubMed ID: 252454

  • 1. Solvents, interfaces and protein structure.
    Richards FM, Richmond T.
    Ciba Found Symp; 1977; (60):23-45. PubMed ID: 252454
    [Abstract] [Full Text] [Related]

  • 2. Free energy determinants of secondary structure formation: I. alpha-Helices.
    Yang AS, Honig B.
    J Mol Biol; 1995 Sep 22; 252(3):351-65. PubMed ID: 7563056
    [Abstract] [Full Text] [Related]

  • 3. Universal effects of solvent species on the stabilized structure of a protein.
    Hayashi T, Inoue M, Yasuda S, Petretto E, Škrbić T, Giacometti A, Kinoshita M.
    J Chem Phys; 2018 Jul 28; 149(4):045105. PubMed ID: 30068177
    [Abstract] [Full Text] [Related]

  • 4. Solvent accessibility, protein surfaces, and protein folding.
    Lesk AM, Chothia C.
    Biophys J; 1980 Oct 28; 32(1):35-47. PubMed ID: 7248454
    [Abstract] [Full Text] [Related]

  • 5. Amino acid conformational preferences and solvation of polar backbone atoms in peptides and proteins.
    Avbelj F.
    J Mol Biol; 2000 Jul 28; 300(5):1335-59. PubMed ID: 10903873
    [Abstract] [Full Text] [Related]

  • 6. Comparison of helix interactions in membrane and soluble alpha-bundle proteins.
    Eilers M, Patel AB, Liu W, Smith SO.
    Biophys J; 2002 May 28; 82(5):2720-36. PubMed ID: 11964258
    [Abstract] [Full Text] [Related]

  • 7. Structural stability of proteins in aqueous and nonpolar environments.
    Yasuda S, Oshima H, Kinoshita M.
    J Chem Phys; 2012 Oct 07; 137(13):135103. PubMed ID: 23039615
    [Abstract] [Full Text] [Related]

  • 8. Position-dependence of stabilizing polar interactions of asparagine in transmembrane helical bundles.
    Lear JD, Gratkowski H, Adamian L, Liang J, DeGrado WF.
    Biochemistry; 2003 Jun 03; 42(21):6400-7. PubMed ID: 12767221
    [Abstract] [Full Text] [Related]

  • 9. Thermodynamics of helix formation in small peptides of varying length in vacuo, in implicit solvent, and in explicit solvent.
    Wang X, Deng B, Sun Z.
    J Mol Model; 2018 Dec 12; 25(1):3. PubMed ID: 30542771
    [Abstract] [Full Text] [Related]

  • 10. The effect of vicinal polar and charged groups on hydrophobic hydration.
    Cheng YK, Rossky PJ.
    Biopolymers; 1999 Dec 12; 50(7):742-50. PubMed ID: 10547529
    [Abstract] [Full Text] [Related]

  • 11. The apolar surface area of amino acids and its empirical correlation with hydrophobic free energy.
    Frömmel C.
    J Theor Biol; 1984 Nov 21; 111(2):247-60. PubMed ID: 6513570
    [Abstract] [Full Text] [Related]

  • 12. Free energy landscape of protein folding in water: explicit vs. implicit solvent.
    Zhou R.
    Proteins; 2003 Nov 01; 53(2):148-61. PubMed ID: 14517967
    [Abstract] [Full Text] [Related]

  • 13. Free energies of amino acid side-chain rotamers in alpha-helices, beta-sheets and alpha-helix N-caps.
    Stapley BJ, Doig AJ.
    J Mol Biol; 1997 Sep 26; 272(3):456-64. PubMed ID: 9325103
    [Abstract] [Full Text] [Related]

  • 14. Solvent accessible surface area of amino acid residues in globular proteins: correlation of apparent transfer free energies with experimental hydrophobicity scales.
    Shaytan AK, Shaitan KV, Khokhlov AR.
    Biomacromolecules; 2009 May 11; 10(5):1224-37. PubMed ID: 19334678
    [Abstract] [Full Text] [Related]

  • 15. Properties of the protein matrix revealed by the free energy of cavity formation.
    Kocher JP, Prévost M, Wodak SJ, Lee B.
    Structure; 1996 Dec 15; 4(12):1517-29. PubMed ID: 8994976
    [Abstract] [Full Text] [Related]

  • 16. An analysis of incorrectly folded protein models. Implications for structure predictions.
    Novotný J, Bruccoleri R, Karplus M.
    J Mol Biol; 1984 Aug 25; 177(4):787-818. PubMed ID: 6434748
    [Abstract] [Full Text] [Related]

  • 17. Statistical and molecular dynamics studies of buried waters in globular proteins.
    Park S, Saven JG.
    Proteins; 2005 Aug 15; 60(3):450-63. PubMed ID: 15937899
    [Abstract] [Full Text] [Related]

  • 18. Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons.
    Nicholls A, Sharp KA, Honig B.
    Proteins; 1991 Aug 15; 11(4):281-96. PubMed ID: 1758883
    [Abstract] [Full Text] [Related]

  • 19. A molecular dynamics analysis of protein structural elements.
    Post CB, Dobson CM, Karplus M.
    Proteins; 1989 Aug 15; 5(4):337-54. PubMed ID: 2798410
    [Abstract] [Full Text] [Related]

  • 20. The occurrence of C--H...O hydrogen bonds in alpha-helices and helix termini in globular proteins.
    Manikandan K, Ramakumar S.
    Proteins; 2004 Sep 01; 56(4):768-81. PubMed ID: 15281129
    [Abstract] [Full Text] [Related]

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