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Journal Abstract Search

218 related items for PubMed ID: 25282536

  • 21. Protein Complexes Detection Based on Semi-Supervised Network Embedding Model.
    Zhu J, Zheng Z, Yang M, Fung GPC, Huang C.
    IEEE/ACM Trans Comput Biol Bioinform; 2021; 18(2):797-803. PubMed ID: 31581089
    [Abstract] [Full Text] [Related]

  • 22. MOEPGA: A novel method to detect protein complexes in yeast protein-protein interaction networks based on MultiObjective Evolutionary Programming Genetic Algorithm.
    Cao B, Luo J, Liang C, Wang S, Song D.
    Comput Biol Chem; 2015 Oct; 58():173-81. PubMed ID: 26298638
    [Abstract] [Full Text] [Related]

  • 23. A New Method for Detecting Protein Complexes based on the Three Node Cliques.
    Zhang W, Zou X.
    IEEE/ACM Trans Comput Biol Bioinform; 2015 Oct; 12(4):879-86. PubMed ID: 26357329
    [Abstract] [Full Text] [Related]

  • 24. A partially shared joint clustering framework for detecting protein complexes from multiple state-specific signed interaction networks.
    Zhan Y, Liu J, Wu M, Tan CSH, Li X, Ou-Yang L.
    Comput Biol Med; 2023 Jun; 159():106936. PubMed ID: 37105110
    [Abstract] [Full Text] [Related]

  • 25. A Type-2 fuzzy data fusion approach for building reliable weighted protein interaction networks with application in protein complex detection.
    Mehranfar A, Ghadiri N, Kouhsar M, Golshani A.
    Comput Biol Med; 2017 Sep 01; 88():18-31. PubMed ID: 28672176
    [Abstract] [Full Text] [Related]

  • 26. Identification of protein complexes from multi-relationship protein interaction networks.
    Li X, Wang J, Zhao B, Wu FX, Pan Y.
    Hum Genomics; 2016 Jul 25; 10 Suppl 2(Suppl 2):17. PubMed ID: 27461193
    [Abstract] [Full Text] [Related]

  • 27. A method for identifying protein complexes with the features of joint co-localization and joint co-expression in static PPI networks.
    Zhang J, Zhong C, Huang Y, Lin HX, Wang M.
    Comput Biol Med; 2019 Aug 25; 111():103333. PubMed ID: 31376777
    [Abstract] [Full Text] [Related]

  • 28. Molecular complex detection in protein interaction networks through reinforcement learning.
    Palukuri MV, Patil RS, Marcotte EM.
    BMC Bioinformatics; 2023 Aug 02; 24(1):306. PubMed ID: 37532987
    [Abstract] [Full Text] [Related]

  • 29. CACO: A Core-Attachment Method With Cross-Species Functional Ortholog Information to Detect Human Protein Complexes.
    Wang W, Meng X, Xiang J, Shuai Y, Bedru HD, Li M.
    IEEE J Biomed Health Inform; 2023 Sep 02; 27(9):4569-4578. PubMed ID: 37399160
    [Abstract] [Full Text] [Related]

  • 30. From communities to protein complexes: A local community detection algorithm on PPI networks.
    Dilmaghani S, Brust MR, Ribeiro CHC, Kieffer E, Danoy G, Bouvry P.
    PLoS One; 2022 Sep 02; 17(1):e0260484. PubMed ID: 35085263
    [Abstract] [Full Text] [Related]

  • 31. CPredictor3.0: detecting protein complexes from PPI networks with expression data and functional annotations.
    Xu Y, Zhou J, Zhou S, Guan J.
    BMC Syst Biol; 2017 Dec 21; 11(Suppl 7):135. PubMed ID: 29322927
    [Abstract] [Full Text] [Related]

  • 32. An effective approach to detecting both small and large complexes from protein-protein interaction networks.
    Xu B, Wang Y, Wang Z, Zhou J, Zhou S, Guan J.
    BMC Bioinformatics; 2017 Oct 16; 18(Suppl 12):419. PubMed ID: 29072136
    [Abstract] [Full Text] [Related]

  • 33. Detection of dynamic protein complexes through Markov Clustering based on Elephant Herd Optimization Approach.
    Rani RR, Ramyachitra D, Brindhadevi A.
    Sci Rep; 2019 Jul 31; 9(1):11106. PubMed ID: 31366992
    [Abstract] [Full Text] [Related]

  • 34. Identification of Protein Complexes Using Weighted PageRank-Nibble Algorithm and Core-Attachment Structure.
    Peng W, Wang J, Zhao B, Wang L.
    IEEE/ACM Trans Comput Biol Bioinform; 2015 Jul 31; 12(1):179-92. PubMed ID: 26357088
    [Abstract] [Full Text] [Related]

  • 35. Detection of overlapping protein complexes in gene expression, phenotype and pathways of Saccharomyces cerevisiae using Prorank based Fuzzy algorithm.
    Manikandan P, Ramyachitra D, Banupriya D.
    Gene; 2016 Apr 15; 580(2):144-158. PubMed ID: 26809099
    [Abstract] [Full Text] [Related]

  • 36. Finding low-conductance sets with dense interactions (FLCD) for better protein complex prediction.
    Wang Y, Qian X.
    BMC Syst Biol; 2017 Mar 14; 11(Suppl 3):22. PubMed ID: 28361714
    [Abstract] [Full Text] [Related]

  • 37. Identifying conserved protein complexes between species by constructing interolog networks.
    Nguyen PV, Srihari S, Leong HW.
    BMC Bioinformatics; 2013 Mar 14; 14 Suppl 16(Suppl 16):S8. PubMed ID: 24564762
    [Abstract] [Full Text] [Related]

  • 38. Protein complex detection based on flower pollination mechanism in multi-relation reconstructed dynamic protein networks.
    Lei X, Fang M, Guo L, Wu FX.
    BMC Bioinformatics; 2019 Mar 29; 20(Suppl 3):131. PubMed ID: 30925866
    [Abstract] [Full Text] [Related]

  • 39. Detecting complexes from edge-weighted PPI networks via genes expression analysis.
    Zhang Z, Song J, Tang J, Xu X, Guo F.
    BMC Syst Biol; 2018 Apr 24; 12(Suppl 4):40. PubMed ID: 29745859
    [Abstract] [Full Text] [Related]

  • 40. Protein functional properties prediction in sparsely-label PPI networks through regularized non-negative matrix factorization.
    Wu Q, Wang Z, Li C, Ye Y, Li Y, Sun N.
    BMC Syst Biol; 2015 Apr 24; 9 Suppl 1(Suppl 1):S9. PubMed ID: 25708164
    [Abstract] [Full Text] [Related]

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