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Journal Abstract Search

177 related items for PubMed ID: 25297679

  • 1. A robust estimation of exon expression to identify alternative spliced genes applied to human tissues and cancer samples.
    Risueño A, Roson-Burgo B, Dolnik A, Hernandez-Rivas JM, Bullinger L, De Las Rivas J.
    BMC Genomics; 2014 Oct 08; 15(1):879. PubMed ID: 25297679
    [Abstract] [Full Text] [Related]

  • 2. Gene expression and isoform variation analysis using Affymetrix Exon Arrays.
    Bemmo A, Benovoy D, Kwan T, Gaffney DJ, Jensen RV, Majewski J.
    BMC Genomics; 2008 Nov 07; 9():529. PubMed ID: 18990248
    [Abstract] [Full Text] [Related]

  • 3. Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.
    Ha KCh, Coulombe-Huntington J, Majewski J.
    BMC Genomics; 2009 Nov 12; 10():519. PubMed ID: 19909511
    [Abstract] [Full Text] [Related]

  • 4. Discovery of tissue-specific exons using comprehensive human exon microarrays.
    Clark TA, Schweitzer AC, Chen TX, Staples MK, Lu G, Wang H, Williams A, Blume JE.
    Genome Biol; 2007 Nov 12; 8(4):R64. PubMed ID: 17456239
    [Abstract] [Full Text] [Related]

  • 5. Detecting tissue-specific regulation of alternative splicing as a qualitative change in microarray data.
    Le K, Mitsouras K, Roy M, Wang Q, Xu Q, Nelson SF, Lee C.
    Nucleic Acids Res; 2004 Dec 14; 32(22):e180. PubMed ID: 15598820
    [Abstract] [Full Text] [Related]

  • 6. Comprehensive exon array data processing method for quantitative analysis of alternative spliced variants.
    Chen P, Lepikhova T, Hu Y, Monni O, Hautaniemi S.
    Nucleic Acids Res; 2011 Oct 14; 39(18):e123. PubMed ID: 21745820
    [Abstract] [Full Text] [Related]

  • 7. Improvements to previous algorithms to predict gene structure and isoform concentrations using Affymetrix Exon arrays.
    Anton MA, Aramburu A, Rubio A.
    BMC Bioinformatics; 2010 Nov 26; 11():578. PubMed ID: 21110835
    [Abstract] [Full Text] [Related]

  • 8. Exon array analysis using re-defined probe sets results in reliable identification of alternatively spliced genes in non-small cell lung cancer.
    Langer W, Sohler F, Leder G, Beckmann G, Seidel H, Gröne J, Hummel M, Sommer A.
    BMC Genomics; 2010 Nov 30; 11():676. PubMed ID: 21118496
    [Abstract] [Full Text] [Related]

  • 9. A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST Arrays.
    Yoshida R, Numata K, Imoto S, Nagasaki M, Doi A, Ueno K, Miyano S.
    Genome Inform; 2006 Nov 30; 17(1):88-99. PubMed ID: 17503359
    [Abstract] [Full Text] [Related]

  • 10. High resolution analysis of the human transcriptome: detection of extensive alternative splicing independent of transcriptional activity.
    Zhou W, Calciano MA, Jordan H, Brenner M, Johnson S, Wu D, Lei L, Pallares D, Beurdeley P, Rouet F, Gill PS, Bracco L, Soucaille C, Einstein R.
    BMC Genet; 2009 Oct 05; 10():63. PubMed ID: 19804644
    [Abstract] [Full Text] [Related]

  • 11. Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.
    Gardina PJ, Clark TA, Shimada B, Staples MK, Yang Q, Veitch J, Schweitzer A, Awad T, Sugnet C, Dee S, Davies C, Williams A, Turpaz Y.
    BMC Genomics; 2006 Dec 27; 7():325. PubMed ID: 17192196
    [Abstract] [Full Text] [Related]

  • 12. MMBGX: a method for estimating expression at the isoform level and detecting differential splicing using whole-transcript Affymetrix arrays.
    Turro E, Lewin A, Rose A, Dallman MJ, Richardson S.
    Nucleic Acids Res; 2010 Jan 27; 38(1):e4. PubMed ID: 19854940
    [Abstract] [Full Text] [Related]

  • 13. Differentially expressed alternatively spliced genes in malignant pleural mesothelioma identified using massively parallel transcriptome sequencing.
    Dong L, Jensen RV, De Rienzo A, Gordon GJ, Xu Y, Sugarbaker DJ, Bueno R.
    BMC Med Genet; 2009 Dec 31; 10():149. PubMed ID: 20043850
    [Abstract] [Full Text] [Related]

  • 14. A statistical method for predicting splice variants between two groups of samples using GeneChip expression array data.
    Fan W, Khalid N, Hallahan AR, Olson JM, Zhao LP.
    Theor Biol Med Model; 2006 Apr 07; 3():19. PubMed ID: 16603076
    [Abstract] [Full Text] [Related]

  • 15. The Usage of Exon-Exon Splice Junctions for the Detection of Alternative Splicing using the REIDS model.
    Van Moerbeke M, Kasim A, Shkedy Z.
    Sci Rep; 2018 May 29; 8(1):8331. PubMed ID: 29844567
    [Abstract] [Full Text] [Related]

  • 16. BEAT: Bioinformatics Exon Array Tool to store, analyze and visualize Affymetrix GeneChip Human Exon Array data from disease experiments.
    Consiglio A, Carella M, De Caro G, Delle Foglie G, Giovannelli C, Grillo G, Ianigro M, Licciulli F, Palumbo O, Piepoli A, Ranieri E, Liuni S.
    BMC Bioinformatics; 2012 Mar 28; 13 Suppl 4(Suppl 4):S21. PubMed ID: 22536968
    [Abstract] [Full Text] [Related]

  • 17. A systematic comparison and evaluation of high density exon arrays and RNA-seq technology used to unravel the peripheral blood transcriptome of sickle cell disease.
    Raghavachari N, Barb J, Yang Y, Liu P, Woodhouse K, Levy D, O'Donnell CJ, Munson PJ, Kato GJ.
    BMC Med Genomics; 2012 Jun 29; 5():28. PubMed ID: 22747986
    [Abstract] [Full Text] [Related]

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