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Journal Abstract Search

104 related items for PubMed ID: 25331593

  • 1. A generative model of identifying informative proteins from dynamic PPI networks.
    Zhang Y, Cheng Y, Jia K, Zhang A.
    Sci China Life Sci; 2014 Nov; 57(11):1080-9. PubMed ID: 25331593
    [Abstract] [Full Text] [Related]

  • 2. Identifying protein complexes based on multiple topological structures in PPI networks.
    Chen B, Wu FX.
    IEEE Trans Nanobioscience; 2013 Sep; 12(3):165-72. PubMed ID: 23974659
    [Abstract] [Full Text] [Related]

  • 3. Identifying protein complexes and functional modules--from static PPI networks to dynamic PPI networks.
    Chen B, Fan W, Liu J, Wu FX.
    Brief Bioinform; 2014 Mar; 15(2):177-94. PubMed ID: 23780996
    [Abstract] [Full Text] [Related]

  • 4. k-Partite cliques of protein interactions: A novel subgraph topology for functional coherence analysis on PPI networks.
    Liu Q, Chen YP, Li J.
    J Theor Biol; 2014 Jan 07; 340():146-54. PubMed ID: 24056214
    [Abstract] [Full Text] [Related]

  • 5. Detection of protein complexes using a protein ranking algorithm.
    Zaki N, Berengueres J, Efimov D.
    Proteins; 2012 Oct 07; 80(10):2459-68. PubMed ID: 22685080
    [Abstract] [Full Text] [Related]

  • 6. Global alignment of protein-protein interaction networks.
    Mongiovì M, Sharan R.
    Methods Mol Biol; 2013 Oct 07; 939():21-34. PubMed ID: 23192538
    [Abstract] [Full Text] [Related]

  • 7. Functional centrality: detecting lethality of proteins in protein interaction networks.
    Tew KL, Li XL, Tan SH.
    Genome Inform; 2007 Oct 07; 19():166-77. PubMed ID: 18546514
    [Abstract] [Full Text] [Related]

  • 8. Methods for protein complex prediction and their contributions towards understanding the organisation, function and dynamics of complexes.
    Srihari S, Yong CH, Patil A, Wong L.
    FEBS Lett; 2015 Sep 14; 589(19 Pt A):2590-602. PubMed ID: 25913176
    [Abstract] [Full Text] [Related]

  • 9. Detecting Functional Modules Based on a Multiple-Grain Model in Large-Scale Protein-Protein Interaction Networks.
    Ji J, Lv J, Yang C, Zhang A.
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Sep 14; 13(4):610-22. PubMed ID: 26394434
    [Abstract] [Full Text] [Related]

  • 10. Neighbor Affinity-Based Core-Attachment Method to Detect Protein Complexes in Dynamic PPI Networks.
    Lei X, Liang J.
    Molecules; 2017 Jul 24; 22(7):. PubMed ID: 28737728
    [Abstract] [Full Text] [Related]

  • 11. msiDBN: a method of identifying critical proteins in dynamic PPI networks.
    Zhang Y, Du N, Li K, Feng J, Jia K, Zhang A.
    Biomed Res Int; 2014 Jul 24; 2014():138410. PubMed ID: 24800204
    [Abstract] [Full Text] [Related]

  • 12. Detection of functional modules from protein interaction networks with an enhanced random walk based algorithm.
    Cai B, Wang H, Zheng H, Wang H.
    Int J Comput Biol Drug Des; 2011 Jul 24; 4(3):290-306. PubMed ID: 21778561
    [Abstract] [Full Text] [Related]

  • 13. Identifying spurious interactions and predicting missing interactions in the protein-protein interaction networks via a generative network model.
    Zhu Y, Zhang XF, Dai DQ, Wu MY.
    IEEE/ACM Trans Comput Biol Bioinform; 2013 Jul 24; 10(1):219-25. PubMed ID: 23702559
    [Abstract] [Full Text] [Related]

  • 14. Analyses of Protein Interaction Networks Using Computational Tools.
    Dong S, Provart NJ.
    Methods Mol Biol; 2018 Jul 24; 1794():97-117. PubMed ID: 29855953
    [Abstract] [Full Text] [Related]

  • 15. Triangle network motifs predict complexes by complementing high-error interactomes with structural information.
    Andreopoulos B, Winter C, Labudde D, Schroeder M.
    BMC Bioinformatics; 2009 Jun 27; 10():196. PubMed ID: 19558694
    [Abstract] [Full Text] [Related]

  • 16. Identifying protein complexes in protein-protein interaction networks by using clique seeds and graph entropy.
    Chen B, Shi J, Zhang S, Wu FX.
    Proteomics; 2013 Jan 27; 13(2):269-77. PubMed ID: 23112006
    [Abstract] [Full Text] [Related]

  • 17. hF-measure: A new measurement for evaluating clusters in protein-protein interaction networks.
    Li M, Wu X, Pan Y, Wang J.
    Proteomics; 2013 Jan 27; 13(2):291-300. PubMed ID: 23193073
    [Abstract] [Full Text] [Related]

  • 18. Protein complexes discovery based on protein-protein interaction data via a regularized sparse generative network model.
    Zhang XF, Dai DQ, Li XX.
    IEEE/ACM Trans Comput Biol Bioinform; 2012 Jan 27; 9(3):857-70. PubMed ID: 22291160
    [Abstract] [Full Text] [Related]

  • 19. Construction and application of dynamic protein interaction network based on time course gene expression data.
    Wang J, Peng X, Li M, Pan Y.
    Proteomics; 2013 Jan 27; 13(2):301-12. PubMed ID: 23225755
    [Abstract] [Full Text] [Related]

  • 20. BalanceAli: Multiple PPI Network Alignment With Balanced High Coverage and Consistency.
    Gao J, Song B, Ke W, Hu X.
    IEEE Trans Nanobioscience; 2017 Jul 27; 16(5):333-340. PubMed ID: 28541215
    [Abstract] [Full Text] [Related]

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