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Journal Abstract Search

136 related items for PubMed ID: 25350598

  • 21. Detecting protein complexes in a PPI network: a gene ontology based multi-objective evolutionary approach.
    Mukhopadhyay A, Ray S, De M.
    Mol Biosyst; 2012 Nov; 8(11):3036-48. PubMed ID: 22990765
    [Abstract] [Full Text] [Related]

  • 22. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
    Xu B, Guan J.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Nov; 11(4):616-27. PubMed ID: 26356332
    [Abstract] [Full Text] [Related]

  • 23. Protein complex prediction in large ontology attributed protein-protein interaction networks.
    Zhang Y, Lin H, Yang Z, Wang J, Li Y, Xu B.
    IEEE/ACM Trans Comput Biol Bioinform; 2013 Nov; 10(3):729-41. PubMed ID: 24091405
    [Abstract] [Full Text] [Related]

  • 24.
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  • 25. Overview of the BioCreative III Workshop.
    Arighi CN, Lu Z, Krallinger M, Cohen KB, Wilbur WJ, Valencia A, Hirschman L, Wu CH.
    BMC Bioinformatics; 2011 Oct 03; 12 Suppl 8(Suppl 8):S1. PubMed ID: 22151647
    [Abstract] [Full Text] [Related]

  • 26. Detection of interaction articles and experimental methods in biomedical literature.
    Schneider G, Clematide S, Rinaldi F.
    BMC Bioinformatics; 2011 Oct 03; 12 Suppl 8(Suppl 8):S13. PubMed ID: 22151872
    [Abstract] [Full Text] [Related]

  • 27. Network simulation reveals significant contribution of network motifs to the age-dependency of yeast protein-protein interaction networks.
    Liang C, Luo J, Song D.
    Mol Biosyst; 2014 Jul 29; 10(9):2277-88. PubMed ID: 24964354
    [Abstract] [Full Text] [Related]

  • 28. Benchmark Evaluation of Protein-Protein Interaction Prediction Algorithms.
    Dunham B, Ganapathiraju MK.
    Molecules; 2021 Dec 22; 27(1):. PubMed ID: 35011283
    [Abstract] [Full Text] [Related]

  • 29. Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data.
    Li M, Wu X, Wang J, Pan Y.
    BMC Bioinformatics; 2012 May 23; 13():109. PubMed ID: 22621308
    [Abstract] [Full Text] [Related]

  • 30. Integrating semantic information into multiple kernels for protein-protein interaction extraction from biomedical literatures.
    Li L, Zhang P, Zheng T, Zhang H, Jiang Z, Huang D.
    PLoS One; 2014 May 23; 9(3):e91898. PubMed ID: 24622773
    [Abstract] [Full Text] [Related]

  • 31. Detection of protein complexes using a protein ranking algorithm.
    Zaki N, Berengueres J, Efimov D.
    Proteins; 2012 Oct 23; 80(10):2459-68. PubMed ID: 22685080
    [Abstract] [Full Text] [Related]

  • 32. PPI-IRO: a two-stage method for protein-protein interaction extraction based on interaction relation ontology.
    Li CX, Chen P, Wang RJ, Wang XJ, Su YR, Li J.
    Int J Data Min Bioinform; 2014 Oct 23; 10(1):98-119. PubMed ID: 25757257
    [Abstract] [Full Text] [Related]

  • 33. Identifying spurious interactions and predicting missing interactions in the protein-protein interaction networks via a generative network model.
    Zhu Y, Zhang XF, Dai DQ, Wu MY.
    IEEE/ACM Trans Comput Biol Bioinform; 2013 Oct 23; 10(1):219-25. PubMed ID: 23702559
    [Abstract] [Full Text] [Related]

  • 34. PLW: Probabilistic Local Walks for detecting protein complexes from protein interaction networks.
    Wong D, Li XL, Wu M, Zheng J, Ng SK.
    BMC Genomics; 2013 Oct 23; 14 Suppl 5(Suppl 5):S15. PubMed ID: 24564427
    [Abstract] [Full Text] [Related]

  • 35. DPCMNE: Detecting Protein Complexes From Protein-Protein Interaction Networks Via Multi-Level Network Embedding.
    Meng X, Xiang J, Zheng R, Wu FX, Li M.
    IEEE/ACM Trans Comput Biol Bioinform; 2022 Oct 23; 19(3):1592-1602. PubMed ID: 33417563
    [Abstract] [Full Text] [Related]

  • 36. Prior knowledge based mining functional modules from Yeast PPI networks with gene ontology.
    Jing L, Ng MK.
    BMC Bioinformatics; 2010 Dec 14; 11 Suppl 11(Suppl 11):S3. PubMed ID: 21172053
    [Abstract] [Full Text] [Related]

  • 37. MOEPGA: A novel method to detect protein complexes in yeast protein-protein interaction networks based on MultiObjective Evolutionary Programming Genetic Algorithm.
    Cao B, Luo J, Liang C, Wang S, Song D.
    Comput Biol Chem; 2015 Oct 14; 58():173-81. PubMed ID: 26298638
    [Abstract] [Full Text] [Related]

  • 38. Protein-protein interaction extraction by leveraging multiple kernels and parsers.
    Miwa M, Saetre R, Miyao Y, Tsujii J.
    Int J Med Inform; 2009 Dec 14; 78(12):e39-46. PubMed ID: 19501018
    [Abstract] [Full Text] [Related]

  • 39. Large-scale protein-protein interactions detection by integrating big biosensing data with computational model.
    You ZH, Li S, Gao X, Luo X, Ji Z.
    Biomed Res Int; 2014 Dec 14; 2014():598129. PubMed ID: 25215285
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  • 40. Identification of protein complexes from multi-relationship protein interaction networks.
    Li X, Wang J, Zhao B, Wu FX, Pan Y.
    Hum Genomics; 2016 Jul 25; 10 Suppl 2(Suppl 2):17. PubMed ID: 27461193
    [Abstract] [Full Text] [Related]

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