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Journal Abstract Search

565 related items for PubMed ID: 25350697

  • 1. A group LASSO-based method for robustly inferring gene regulatory networks from multiple time-course datasets.
    Liu LZ, Wu FX, Zhang WJ.
    BMC Syst Biol; 2014; 8 Suppl 3(Suppl 3):S1. PubMed ID: 25350697
    [Abstract] [Full Text] [Related]

  • 2. MICRAT: a novel algorithm for inferring gene regulatory networks using time series gene expression data.
    Yang B, Xu Y, Maxwell A, Koh W, Gong P, Zhang C.
    BMC Syst Biol; 2018 Dec 14; 12(Suppl 7):115. PubMed ID: 30547796
    [Abstract] [Full Text] [Related]

  • 3.
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    [No Abstract] [Full Text] [Related]

  • 4. TimeDelay-ARACNE: Reverse engineering of gene networks from time-course data by an information theoretic approach.
    Zoppoli P, Morganella S, Ceccarelli M.
    BMC Bioinformatics; 2010 Mar 25; 11():154. PubMed ID: 20338053
    [Abstract] [Full Text] [Related]

  • 5. Reverse engineering gene regulatory networks: coupling an optimization algorithm with a parameter identification technique.
    Hsiao YT, Lee WP.
    BMC Bioinformatics; 2014 Mar 25; 15 Suppl 15(Suppl 15):S8. PubMed ID: 25474560
    [Abstract] [Full Text] [Related]

  • 6. Inferring large-scale gene regulatory networks using a low-order constraint-based algorithm.
    Wang M, Augusto Benedito V, Xuechun Zhao P, Udvardi M.
    Mol Biosyst; 2010 Jun 25; 6(6):988-98. PubMed ID: 20485743
    [Abstract] [Full Text] [Related]

  • 7. Evaluating methods of inferring gene regulatory networks highlights their lack of performance for single cell gene expression data.
    Chen S, Mar JC.
    BMC Bioinformatics; 2018 Jun 19; 19(1):232. PubMed ID: 29914350
    [Abstract] [Full Text] [Related]

  • 8. bLARS: An Algorithm to Infer Gene Regulatory Networks.
    Singh N, Vidyasagar M.
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Jun 19; 13(2):301-14. PubMed ID: 27045829
    [Abstract] [Full Text] [Related]

  • 9. [Study of Algorithms Reconstructing Gene Regulatory Network with Resampling and Conditional Mutual Information].
    Liu F.
    Sheng Wu Yi Xue Gong Cheng Xue Za Zhi; 2016 Oct 19; 33(5):985-90. PubMed ID: 29714955
    [Abstract] [Full Text] [Related]

  • 10. GeNOSA: inferring and experimentally supporting quantitative gene regulatory networks in prokaryotes.
    Chen YH, Yang CD, Tseng CP, Huang HD, Ho SY.
    Bioinformatics; 2015 Jul 01; 31(13):2151-8. PubMed ID: 25717191
    [Abstract] [Full Text] [Related]

  • 11. A Maximum A Posteriori Probability and Time-Varying Approach for Inferring Gene Regulatory Networks from Time Course Gene Microarray Data.
    Chan SC, Zhang L, Wu HC, Tsui KM.
    IEEE/ACM Trans Comput Biol Bioinform; 2015 Jul 01; 12(1):123-35. PubMed ID: 26357083
    [Abstract] [Full Text] [Related]

  • 12. Transcriptional network inference from functional similarity and expression data: a global supervised approach.
    Ambroise J, Robert A, Macq B, Gala JL.
    Stat Appl Genet Mol Biol; 2012 Jan 06; 11(1):Article 2. PubMed ID: 22499684
    [Abstract] [Full Text] [Related]

  • 13. A new asynchronous parallel algorithm for inferring large-scale gene regulatory networks.
    Xiao X, Zhang W, Zou X.
    PLoS One; 2015 Jan 06; 10(3):e0119294. PubMed ID: 25807392
    [Abstract] [Full Text] [Related]

  • 14. Inferring gene regulatory networks by integrating ChIP-seq/chip and transcriptome data via LASSO-type regularization methods.
    Qin J, Hu Y, Xu F, Yalamanchili HK, Wang J.
    Methods; 2014 Jun 01; 67(3):294-303. PubMed ID: 24650566
    [Abstract] [Full Text] [Related]

  • 15. A hybrid Bayesian network learning method for constructing gene networks.
    Wang M, Chen Z, Cloutier S.
    Comput Biol Chem; 2007 Oct 01; 31(5-6):361-72. PubMed ID: 17889617
    [Abstract] [Full Text] [Related]

  • 16. Reverse engineering module networks by PSO-RNN hybrid modeling.
    Zhang Y, Xuan J, de los Reyes BG, Clarke R, Ressom HW.
    BMC Genomics; 2009 Jul 07; 10 Suppl 1(Suppl 1):S15. PubMed ID: 19594874
    [Abstract] [Full Text] [Related]

  • 17. Weighted lasso in graphical Gaussian modeling for large gene network estimation based on microarray data.
    Shimamura T, Imoto S, Yamaguchi R, Miyano S.
    Genome Inform; 2007 Jul 07; 19():142-53. PubMed ID: 18546512
    [Abstract] [Full Text] [Related]

  • 18. A novel gene network inference algorithm using predictive minimum description length approach.
    Chaitankar V, Ghosh P, Perkins EJ, Gong P, Deng Y, Zhang C.
    BMC Syst Biol; 2010 May 28; 4 Suppl 1(Suppl 1):S7. PubMed ID: 20522257
    [Abstract] [Full Text] [Related]

  • 19. Inference of gene regulatory networks with variable time delay from time-series microarray data.
    ElBakry O, Ahmad MO, Swamy MN.
    IEEE/ACM Trans Comput Biol Bioinform; 2013 May 28; 10(3):671-87. PubMed ID: 24091400
    [Abstract] [Full Text] [Related]

  • 20. Cross-platform microarray data normalisation for regulatory network inference.
    Sîrbu A, Ruskin HJ, Crane M.
    PLoS One; 2010 Nov 12; 5(11):e13822. PubMed ID: 21103045
    [Abstract] [Full Text] [Related]

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