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Journal Abstract Search

371 related items for PubMed ID: 25402006

  • 1. In silico prediction of physical protein interactions and characterization of interactome orphans.
    Kotlyar M, Pastrello C, Pivetta F, Lo Sardo A, Cumbaa C, Li H, Naranian T, Niu Y, Ding Z, Vafaee F, Broackes-Carter F, Petschnigg J, Mills GB, Jurisicova A, Stagljar I, Maestro R, Jurisica I.
    Nat Methods; 2015 Jan; 12(1):79-84. PubMed ID: 25402006
    [Abstract] [Full Text] [Related]

  • 2. MEGADOCK-Web: an integrated database of high-throughput structure-based protein-protein interaction predictions.
    Hayashi T, Matsuzaki Y, Yanagisawa K, Ohue M, Akiyama Y.
    BMC Bioinformatics; 2018 May 08; 19(Suppl 4):62. PubMed ID: 29745830
    [Abstract] [Full Text] [Related]

  • 3. Network analysis and in silico prediction of protein-protein interactions with applications in drug discovery.
    Murakami Y, Tripathi LP, Prathipati P, Mizuguchi K.
    Curr Opin Struct Biol; 2017 Jun 08; 44():134-142. PubMed ID: 28364585
    [Abstract] [Full Text] [Related]

  • 4. Predicting Protein-Protein Interactions from the Molecular to the Proteome Level.
    Keskin O, Tuncbag N, Gursoy A.
    Chem Rev; 2016 Apr 27; 116(8):4884-909. PubMed ID: 27074302
    [Abstract] [Full Text] [Related]

  • 5. Online predicted human interaction database.
    Brown KR, Jurisica I.
    Bioinformatics; 2005 May 01; 21(9):2076-82. PubMed ID: 15657099
    [Abstract] [Full Text] [Related]

  • 6. Efficient prediction of human protein-protein interactions at a global scale.
    Schoenrock A, Samanfar B, Pitre S, Hooshyar M, Jin K, Phillips CA, Wang H, Phanse S, Omidi K, Gui Y, Alamgir M, Wong A, Barrenäs F, Babu M, Benson M, Langston MA, Green JR, Dehne F, Golshani A.
    BMC Bioinformatics; 2014 Dec 10; 15(1):383. PubMed ID: 25492630
    [Abstract] [Full Text] [Related]

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  • 8. pathDIP: an annotated resource for known and predicted human gene-pathway associations and pathway enrichment analysis.
    Rahmati S, Abovsky M, Pastrello C, Jurisica I.
    Nucleic Acids Res; 2017 Jan 04; 45(D1):D419-D426. PubMed ID: 27899558
    [Abstract] [Full Text] [Related]

  • 9. Text mining and visualisation of Protein-Protein Interactions.
    Tsai FS.
    Int J Comput Biol Drug Des; 2011 Jan 04; 4(3):239-44. PubMed ID: 21778557
    [Abstract] [Full Text] [Related]

  • 10. PPI finder: a mining tool for human protein-protein interactions.
    He M, Wang Y, Li W.
    PLoS One; 2009 Jan 04; 4(2):e4554. PubMed ID: 19234603
    [Abstract] [Full Text] [Related]

  • 11. HAPPI: an online database of comprehensive human annotated and predicted protein interactions.
    Chen JY, Mamidipalli S, Huan T.
    BMC Genomics; 2009 Jul 07; 10 Suppl 1(Suppl 1):S16. PubMed ID: 19594875
    [Abstract] [Full Text] [Related]

  • 12. Prediction of Protein-Protein Interactions by Evidence Combining Methods.
    Chang JW, Zhou YQ, Ul Qamar MT, Chen LL, Ding YD.
    Int J Mol Sci; 2016 Nov 22; 17(11):. PubMed ID: 27879651
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  • 15. APID database: redefining protein-protein interaction experimental evidences and binary interactomes.
    Alonso-López D, Campos-Laborie FJ, Gutiérrez MA, Lambourne L, Calderwood MA, Vidal M, De Las Rivas J.
    Database (Oxford); 2019 Jan 01; 2019():. PubMed ID: 30715274
    [Abstract] [Full Text] [Related]

  • 16. MEDICI: Mining Essentiality Data to Identify Critical Interactions for Cancer Drug Target Discovery and Development.
    Harati S, Cooper LA, Moran JD, Giuste FO, Du Y, Ivanov AA, Johns MA, Khuri FR, Fu H, Moreno CS.
    PLoS One; 2017 Jan 01; 12(1):e0170339. PubMed ID: 28118365
    [Abstract] [Full Text] [Related]

  • 17. In Silico Protein-Protein Interactions: Avoiding Data and Method Biases Over Sensitivity and Specificity.
    Folador EL, de Oliveira Junior AF, Tiwari S, Jamal SB, Ferreira RS, Barh D, Ghosh P, Silva A, Azevedo V.
    Curr Protein Pept Sci; 2015 Jan 01; 16(8):689-700. PubMed ID: 25961403
    [Abstract] [Full Text] [Related]

  • 18. Using an in situ proximity ligation assay to systematically profile endogenous protein-protein interactions in a pathway network.
    Chen TC, Lin KT, Chen CH, Lee SA, Lee PY, Liu YW, Kuo YL, Wang FS, Lai JM, Huang CY.
    J Proteome Res; 2014 Dec 05; 13(12):5339-46. PubMed ID: 25241761
    [Abstract] [Full Text] [Related]

  • 19. Computational identification of non-synonymous polymorphisms within regions corresponding to protein interaction sites.
    Skrlj B, Kunej T.
    Comput Biol Med; 2016 Dec 01; 79():30-35. PubMed ID: 27744178
    [Abstract] [Full Text] [Related]

  • 20. Automated feature engineering improves prediction of protein-protein interactions.
    Sumonja N, Gemovic B, Veljkovic N, Perovic V.
    Amino Acids; 2019 Aug 01; 51(8):1187-1200. PubMed ID: 31278492
    [Abstract] [Full Text] [Related]

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