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Journal Abstract Search

296 related items for PubMed ID: 25432759

  • 1. ITC analysis of ligand binding to preQ₁ riboswitches.
    Liberman JA, Bogue JT, Jenkins JL, Salim M, Wedekind JE.
    Methods Enzymol; 2014; 549():435-50. PubMed ID: 25432759
    [Abstract] [Full Text] [Related]

  • 2. Nucleobase mutants of a bacterial preQ1-II riboswitch that uncouple metabolite sensing from gene regulation.
    Dutta D, Wedekind JE.
    J Biol Chem; 2020 Feb 28; 295(9):2555-2567. PubMed ID: 31659117
    [Abstract] [Full Text] [Related]

  • 3. Synthetic ligands for PreQ1 riboswitches provide structural and mechanistic insights into targeting RNA tertiary structure.
    Connelly CM, Numata T, Boer RE, Moon MH, Sinniah RS, Barchi JJ, Ferré-D'Amaré AR, Schneekloth JS.
    Nat Commun; 2019 Apr 02; 10(1):1501. PubMed ID: 30940810
    [Abstract] [Full Text] [Related]

  • 4. Structural analysis of a class III preQ1 riboswitch reveals an aptamer distant from a ribosome-binding site regulated by fast dynamics.
    Liberman JA, Suddala KC, Aytenfisu A, Chan D, Belashov IA, Salim M, Mathews DH, Spitale RC, Walter NG, Wedekind JE.
    Proc Natl Acad Sci U S A; 2015 Jul 07; 112(27):E3485-94. PubMed ID: 26106162
    [Abstract] [Full Text] [Related]

  • 5. A chemical probe based on the PreQ1 metabolite enables transcriptome-wide mapping of binding sites.
    Balaratnam S, Rhodes C, Bume DD, Connelly C, Lai CC, Kelley JA, Yazdani K, Homan PJ, Incarnato D, Numata T, Schneekloth JS.
    Nat Commun; 2021 Oct 06; 12(1):5856. PubMed ID: 34615874
    [Abstract] [Full Text] [Related]

  • 6. Riboswitch structure in the ligand-free state.
    Liberman JA, Wedekind JE.
    Wiley Interdiscip Rev RNA; 2012 Oct 06; 3(3):369-84. PubMed ID: 21957061
    [Abstract] [Full Text] [Related]

  • 7. Isothermal Titration Calorimetry Measurements of Riboswitch-Ligand Interactions.
    Jones CP, Piszczek G, Ferré-D'Amaré AR.
    Methods Mol Biol; 2019 Oct 06; 1964():75-87. PubMed ID: 30929236
    [Abstract] [Full Text] [Related]

  • 8. Observation of preQ1-II riboswitch dynamics using single-molecule FRET.
    Warnasooriya C, Ling C, Belashov IA, Salim M, Wedekind JE, Ermolenko DN.
    RNA Biol; 2019 Sep 06; 16(9):1086-1092. PubMed ID: 30328747
    [Abstract] [Full Text] [Related]

  • 9. Isothermal Titration Calorimetry Analysis of a Cooperative Riboswitch Using an Interdependent-Sites Binding Model.
    Cavender CE, Schroeder GM, Mathews DH, Wedekind JE.
    Methods Mol Biol; 2023 Sep 06; 2568():53-73. PubMed ID: 36227562
    [Abstract] [Full Text] [Related]

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  • 11. Rational Re-engineering of a Transcriptional Silencing PreQ1 Riboswitch.
    Wu MC, Lowe PT, Robinson CJ, Vincent HA, Dixon N, Leigh J, Micklefield J.
    J Am Chem Soc; 2015 Jul 22; 137(28):9015-21. PubMed ID: 26106809
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  • 15. Characterization of Engineered PreQ1 Riboswitches for Inducible Gene Regulation in Mycobacteria.
    Van Vlack ER, Topp S, Seeliger JC.
    J Bacteriol; 2017 Mar 15; 199(6):. PubMed ID: 28069821
    [Abstract] [Full Text] [Related]

  • 16. A small RNA that cooperatively senses two stacked metabolites in one pocket for gene control.
    Schroeder GM, Cavender CE, Blau ME, Jenkins JL, Mathews DH, Wedekind JE.
    Nat Commun; 2022 Jan 11; 13(1):199. PubMed ID: 35017488
    [Abstract] [Full Text] [Related]

  • 17. Isothermal titration calorimetry of protein-protein interactions.
    Pierce MM, Raman CS, Nall BT.
    Methods; 1999 Oct 11; 19(2):213-21. PubMed ID: 10527727
    [Abstract] [Full Text] [Related]

  • 18. Superior cellular activities of azido- over amino-functionalized ligands for engineered preQ1 riboswitches in E.coli.
    Neuner E, Frener M, Lusser A, Micura R.
    RNA Biol; 2018 Oct 11; 15(10):1376-1383. PubMed ID: 30332908
    [Abstract] [Full Text] [Related]

  • 19. Structure and function analysis of a type III preQ1-I riboswitch from Escherichia coli reveals direct metabolite sensing by the Shine-Dalgarno sequence.
    Schroeder GM, Kiliushik D, Jenkins JL, Wedekind JE.
    J Biol Chem; 2023 Oct 11; 299(10):105208. PubMed ID: 37660906
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