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PUBMED FOR HANDHELDS

Journal Abstract Search


142 related items for PubMed ID: 25435900

  • 1. Pin-Align: a new dynamic programming approach to align protein-protein interaction networks.
    Amir-Ghiasvand F, Nowzari-Dalini A, Momenzadeh V.
    Comput Math Methods Med; 2014; 2014():393908. PubMed ID: 25435900
    [Abstract] [Full Text] [Related]

  • 2. Pairwise alignment of interaction networks by fast identification of maximal conserved patterns.
    Tian W, Samatova NF.
    Pac Symp Biocomput; 2009; ():99-110. PubMed ID: 19209698
    [Abstract] [Full Text] [Related]

  • 3. IsoRankN: spectral methods for global alignment of multiple protein networks.
    Liao CS, Lu K, Baym M, Singh R, Berger B.
    Bioinformatics; 2009 Jun 15; 25(12):i253-8. PubMed ID: 19477996
    [Abstract] [Full Text] [Related]

  • 4. Global alignment of protein-protein interaction networks.
    Mongiovì M, Sharan R.
    Methods Mol Biol; 2013 Jun 15; 939():21-34. PubMed ID: 23192538
    [Abstract] [Full Text] [Related]

  • 5. MPGM: Scalable and Accurate Multiple Network Alignment.
    Kazemi E, Grossglauser M.
    IEEE/ACM Trans Comput Biol Bioinform; 2020 Jun 15; 17(6):2040-2052. PubMed ID: 31056510
    [Abstract] [Full Text] [Related]

  • 6. BalanceAli: Multiple PPI Network Alignment With Balanced High Coverage and Consistency.
    Gao J, Song B, Ke W, Hu X.
    IEEE Trans Nanobioscience; 2017 Jul 15; 16(5):333-340. PubMed ID: 28541215
    [Abstract] [Full Text] [Related]

  • 7. Graemlin: general and robust alignment of multiple large interaction networks.
    Flannick J, Novak A, Srinivasan BS, McAdams HH, Batzoglou S.
    Genome Res; 2006 Sep 15; 16(9):1169-81. PubMed ID: 16899655
    [Abstract] [Full Text] [Related]

  • 8. Global Alignment of Protein-Protein Interaction Networks: A Survey.
    Elmsallati A, Clark C, Kalita J.
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Sep 15; 13(4):689-705. PubMed ID: 26336140
    [Abstract] [Full Text] [Related]

  • 9. NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks.
    Hu J, Kehr B, Reinert K.
    Bioinformatics; 2014 Feb 15; 30(4):540-8. PubMed ID: 24336806
    [Abstract] [Full Text] [Related]

  • 10. A Novel Computational Approach for Global Alignment for Multiple Biological Networks.
    Djeddi WE, Yahia SB, Nguifo EM.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 Feb 15; 15(6):2060-2066. PubMed ID: 29994444
    [Abstract] [Full Text] [Related]

  • 11. C-GRAAL: common-neighbors-based global GRAph ALignment of biological networks.
    Memišević V, Pržulj N.
    Integr Biol (Camb); 2012 Jul 15; 4(7):734-43. PubMed ID: 22234340
    [Abstract] [Full Text] [Related]

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  • 14. INDEX: Incremental depth extension approach for protein-protein interaction networks alignment.
    Mir A, Naghibzadeh M, Saadati N.
    Biosystems; 2017 Dec 15; 162():24-34. PubMed ID: 28860070
    [Abstract] [Full Text] [Related]

  • 15. DualAligner: a dual alignment-based strategy to align protein interaction networks.
    Seah BS, Bhowmick SS, Dewey CF.
    Bioinformatics; 2014 Sep 15; 30(18):2619-26. PubMed ID: 24872427
    [Abstract] [Full Text] [Related]

  • 16. LocalAli: an evolutionary-based local alignment approach to identify functionally conserved modules in multiple networks.
    Hu J, Reinert K.
    Bioinformatics; 2015 Feb 01; 31(3):363-72. PubMed ID: 25282642
    [Abstract] [Full Text] [Related]

  • 17. Construction and application of dynamic protein interaction network based on time course gene expression data.
    Wang J, Peng X, Li M, Pan Y.
    Proteomics; 2013 Jan 01; 13(2):301-12. PubMed ID: 23225755
    [Abstract] [Full Text] [Related]

  • 18. GraphCrunch 2: Software tool for network modeling, alignment and clustering.
    Kuchaiev O, Stevanović A, Hayes W, Pržulj N.
    BMC Bioinformatics; 2011 Jan 19; 12():24. PubMed ID: 21244715
    [Abstract] [Full Text] [Related]

  • 19. Joint Alignment of Multiple Protein-Protein Interaction Networks via Convex Optimization.
    Hashemifar S, Huang Q, Xu J.
    J Comput Biol; 2016 Nov 19; 23(11):903-911. PubMed ID: 27428933
    [Abstract] [Full Text] [Related]

  • 20. ANCA: Alignment-Based Network Construction Algorithm.
    Chow K, Sarkar A, Elhesha R, Cinaglia P, Ay A, Kahveci T.
    IEEE/ACM Trans Comput Biol Bioinform; 2021 Nov 19; 18(2):512-524. PubMed ID: 31226082
    [Abstract] [Full Text] [Related]


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