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PUBMED FOR HANDHELDS

Journal Abstract Search


142 related items for PubMed ID: 25435900

  • 21. Functionally guided alignment of protein interaction networks for module detection.
    Ali W, Deane CM.
    Bioinformatics; 2009 Dec 01; 25(23):3166-73. PubMed ID: 19797409
    [Abstract] [Full Text] [Related]

  • 22. SAMNA: accurate alignment of multiple biological networks based on simulated annealing.
    Chen J, Wang Z, Huang J.
    J Integr Bioinform; 2023 Dec 01; 20(4):. PubMed ID: 38097366
    [Abstract] [Full Text] [Related]

  • 23. hF-measure: A new measurement for evaluating clusters in protein-protein interaction networks.
    Li M, Wu X, Pan Y, Wang J.
    Proteomics; 2013 Jan 01; 13(2):291-300. PubMed ID: 23193073
    [Abstract] [Full Text] [Related]

  • 24. GreedyPlus: An Algorithm for the Alignment of Interface Interaction Networks.
    Law B, Bader GD.
    Sci Rep; 2015 Jul 13; 5():12074. PubMed ID: 26165520
    [Abstract] [Full Text] [Related]

  • 25. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
    Alkan F, Erten C.
    Bioinformatics; 2015 Jul 15; 31(14):2356-63. PubMed ID: 25788620
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  • 27. Index-Based Network Aligner of Protein-Protein Interaction Networks.
    Elmsallati A, Msalati A, Kalita J.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 Jul 15; 15(1):330-336. PubMed ID: 28113986
    [Abstract] [Full Text] [Related]

  • 28. Protein2Vec: Aligning Multiple PPI Networks with Representation Learning.
    Gao J, Tian L, Lv T, Wang J, Song B, Hu X.
    IEEE/ACM Trans Comput Biol Bioinform; 2021 Jul 15; 18(1):240-249. PubMed ID: 31478867
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  • 30. Alignment of protein interaction networks by integer quadratic programming.
    Li Z, Wang Y, Zhang S, Zhang XS, Chen L.
    Conf Proc IEEE Eng Med Biol Soc; 2006 Jul 15; 2006():5527-30. PubMed ID: 17945906
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  • 34. Automatic parameter learning for multiple local network alignment.
    Flannick J, Novak A, Do CB, Srinivasan BS, Batzoglou S.
    J Comput Biol; 2009 Aug 15; 16(8):1001-22. PubMed ID: 19645599
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  • 35. Scalable global alignment for multiple biological networks.
    Shih YK, Parthasarathy S.
    BMC Bioinformatics; 2012 Mar 21; 13 Suppl 3(Suppl 3):S11. PubMed ID: 22536895
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  • 38. Visualization of protein interaction networks: problems and solutions.
    Agapito G, Guzzi PH, Cannataro M.
    BMC Bioinformatics; 2013 Mar 21; 14 Suppl 1(Suppl 1):S1. PubMed ID: 23368786
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  • 39. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
    Xu B, Guan J.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Mar 21; 11(4):616-27. PubMed ID: 26356332
    [Abstract] [Full Text] [Related]

  • 40. Protopia: a protein-protein interaction tool.
    Real-Chicharro A, Ruiz-Mostazo I, Navas-Delgado I, Kerzazi A, Chniber O, Sánchez-Jiménez F, Medina MA, Aldana-Montes JF.
    BMC Bioinformatics; 2009 Oct 15; 10 Suppl 12(Suppl 12):S17. PubMed ID: 19828077
    [Abstract] [Full Text] [Related]


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