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Journal Abstract Search

115 related items for PubMed ID: 25477149

  • 1. An efficient algorithm for pairwise local alignment of protein interaction networks.
    Chen W, Schmidt M, Tian W, Samatova NF, Zhang S.
    J Bioinform Comput Biol; 2015 Apr; 13(2):1550003. PubMed ID: 25477149
    [Abstract] [Full Text] [Related]

  • 2. Pairwise alignment of interaction networks by fast identification of maximal conserved patterns.
    Tian W, Samatova NF.
    Pac Symp Biocomput; 2009 Apr; ():99-110. PubMed ID: 19209698
    [Abstract] [Full Text] [Related]

  • 3. Pairwise Biological Network Alignment Based on Discrete Bat Algorithm.
    Chen J, Zhang Y, Xia JF.
    Comput Math Methods Med; 2021 Apr; 2021():5548993. PubMed ID: 34777564
    [Abstract] [Full Text] [Related]

  • 4. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
    Maskey S, Cho YR.
    BMC Genomics; 2019 Dec 24; 20(Suppl 9):964. PubMed ID: 31874635
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  • 6. LocalAli: an evolutionary-based local alignment approach to identify functionally conserved modules in multiple networks.
    Hu J, Reinert K.
    Bioinformatics; 2015 Feb 01; 31(3):363-72. PubMed ID: 25282642
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  • 9. INDEX: Incremental depth extension approach for protein-protein interaction networks alignment.
    Mir A, Naghibzadeh M, Saadati N.
    Biosystems; 2017 Dec 01; 162():24-34. PubMed ID: 28860070
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  • 10. Scalable global alignment for multiple biological networks.
    Shih YK, Parthasarathy S.
    BMC Bioinformatics; 2012 Mar 21; 13 Suppl 3(Suppl 3):S11. PubMed ID: 22536895
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  • 11. Global Biological Network Alignment by Using Efficient Memetic Algorithm.
    Maoguo Gong, Zhenglin Peng, Lijia Ma, Jiaxiang Huang.
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Nov 21; 13(6):1117-1129. PubMed ID: 28055895
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  • 12. Local optimization for global alignment of protein interaction networks.
    Chindelevitch L, Liao CS, Berger B.
    Pac Symp Biocomput; 2010 Nov 21; ():123-32. PubMed ID: 19908365
    [Abstract] [Full Text] [Related]

  • 13. A space-efficient algorithm for the constrained pairwise sequence alignment problem.
    He D, Arslan AN.
    Genome Inform; 2005 Nov 21; 16(2):237-46. PubMed ID: 16901106
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  • 15. Global multiple protein-protein interaction network alignment by combining pairwise network alignments.
    Dohrmann J, Puchin J, Singh R.
    BMC Bioinformatics; 2015 Nov 21; 16 Suppl 13(Suppl 13):S11. PubMed ID: 26423128
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  • 17. CUFID-query: accurate network querying through random walk based network flow estimation.
    Jeong H, Qian X, Yoon BJ.
    BMC Bioinformatics; 2017 Dec 28; 18(Suppl 14):500. PubMed ID: 29297279
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  • 18. ModuleSearch: finding functional modules in a protein-protein interaction network.
    Cui G, Shrestha R, Han K.
    Comput Methods Biomech Biomed Engin; 2012 Dec 28; 15(7):691-9. PubMed ID: 21827286
    [Abstract] [Full Text] [Related]

  • 19. Global Alignment of Protein-Protein Interaction Networks: A Survey.
    Elmsallati A, Clark C, Kalita J.
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Dec 28; 13(4):689-705. PubMed ID: 26336140
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  • 20. Node Handprinting: A Scalable and Accurate Algorithm for Aligning Multiple Biological Networks.
    Radu A, Charleston M.
    J Comput Biol; 2015 Jul 28; 22(7):687-97. PubMed ID: 25695597
    [Abstract] [Full Text] [Related]

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